Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178025.1_202017-04-
25] 7,290 sequences; 12,699,436 total letters
Query= AAMG01002183.1
Length=408
Score E
Sequences producing significant alignments: (Bits) Value
seq3068 324 3e-86
seq1465 226 7e-57
>seq3068
Length=5922
Score = 324 bits (358), Expect = 3e-86
Identities = 279/344 (81%), Gaps = 6/344 (2%)
Strand=Plus/Minus
Query 13 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 72
|||| |||||||||||||||||||||||||||||||||||||||| || ||||||| ||
Sbjct 5040 AAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCGAGCGTTAATCG 4981
Query 73 GAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGG 132
|||||||||||||||||| ||||| ||| ||||| |||| | || |||||| | ||
Sbjct 4980 GAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTTGCTAAGACCGATGTGAAATCCCCGGG 4921
Query 133 CTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGT---GCAGGAGGGGCAAGTGG 189
||||||| || ||||| || | |||| ||||||||| |||| |||| || |
Sbjct 4920 CTCAACCTGGGAACTGCATTGGTGACTGGCAGGCTAGAGTATGGCAGAGGGGG---GTAG 4864
Query 190 AATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGG 249
|||||| ||||||| |||||||||||||| || ||||||| ||| |||||||||| |
Sbjct 4863 AATTCCACGTGTAGCAGTGAAATGCGTAGAGATGTGGAGGAATACCGATGGCGAAGGCAG 4804
Query 250 CTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATA 309
| |||| | |||||| || | || |||||||||||||||||||||||||||||||
Sbjct 4803 CCCCCTGGGCCAATACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGATA 4744
Query 310 CCCTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGG 353
||||||||||||||||| ||||||||| ||||| ||| ||||
Sbjct 4743 CCCTGGTAGTCCACGCCCTAAACGATGTCAACTAGTTGTTGGGG 4700
>seq1465
Length=221
Score = 226 bits (250), Expect = 7e-57
Identities = 186/223 (83%), Gaps = 5/223 (2%)
Strand=Plus/Plus
Query 188 GGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGC 247
||||||||| ||||||||||| |||||| |||||| |||||||||||| ||||||||||
Sbjct 1 GGAATTCCTGGTGTAGCGGTGGAATGCGCAGATATCAGGAGGAACACCGATGGCGAAGGC 60
Query 248 GGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGA 307
| | |||| | | ||||||| |||||| ||||||| |||||||| ||||||||||||
Sbjct 61 AGGTCTCTGGGCCGCAACTGACGCTGAGGAGCGAAAGCATGGGGAGCGAACAGGATTAGA 120
Query 308 TACCCTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCAT---AAGTGC 364
||||||||||||||| |||||||||| || ||||||||| ||||| ||| | | |
Sbjct 121 TACCCTGGTAGTCCATGCCGTAAACGTTGGGCACTAGGTGT-GGGGCTCATTCCACGAGT 179
Query 365 TCCGGTGCCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGT 407
||| ||||||||||||||||| ||||| || ||||||||||
Sbjct 180 TCC-GTGCCGCAGCAAACGCATTAAGTGCCCCGCCTGGGGAGT 221
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203112286720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |