Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178025.1_202017-04- 25] 7,290 sequences; 12,699,436 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq3068 324 3e-86 seq1465 226 7e-57 >seq3068 Length=5922 Score = 324 bits (358), Expect = 3e-86 Identities = 279/344 (81%), Gaps = 6/344 (2%) Strand=Plus/Minus Query 13 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 72 |||| |||||||||||||||||||||||||||||||||||||||| || ||||||| || Sbjct 5040 AAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCGAGCGTTAATCG 4981 Query 73 GAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGG 132 |||||||||||||||||| ||||| ||| ||||| |||| | || |||||| | || Sbjct 4980 GAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTTGCTAAGACCGATGTGAAATCCCCGGG 4921 Query 133 CTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGT---GCAGGAGGGGCAAGTGG 189 ||||||| || ||||| || | |||| ||||||||| |||| |||| || | Sbjct 4920 CTCAACCTGGGAACTGCATTGGTGACTGGCAGGCTAGAGTATGGCAGAGGGGG---GTAG 4864 Query 190 AATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGG 249 |||||| ||||||| |||||||||||||| || ||||||| ||| |||||||||| | Sbjct 4863 AATTCCACGTGTAGCAGTGAAATGCGTAGAGATGTGGAGGAATACCGATGGCGAAGGCAG 4804 Query 250 CTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATA 309 | |||| | |||||| || | || ||||||||||||||||||||||||||||||| Sbjct 4803 CCCCCTGGGCCAATACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGATA 4744 Query 310 CCCTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGG 353 ||||||||||||||||| ||||||||| ||||| ||| |||| Sbjct 4743 CCCTGGTAGTCCACGCCCTAAACGATGTCAACTAGTTGTTGGGG 4700 >seq1465 Length=221 Score = 226 bits (250), Expect = 7e-57 Identities = 186/223 (83%), Gaps = 5/223 (2%) Strand=Plus/Plus Query 188 GGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGC 247 ||||||||| ||||||||||| |||||| |||||| |||||||||||| |||||||||| Sbjct 1 GGAATTCCTGGTGTAGCGGTGGAATGCGCAGATATCAGGAGGAACACCGATGGCGAAGGC 60 Query 248 GGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGA 307 | | |||| | | ||||||| |||||| ||||||| |||||||| |||||||||||| Sbjct 61 AGGTCTCTGGGCCGCAACTGACGCTGAGGAGCGAAAGCATGGGGAGCGAACAGGATTAGA 120 Query 308 TACCCTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCAT---AAGTGC 364 ||||||||||||||| |||||||||| || ||||||||| ||||| ||| | | | Sbjct 121 TACCCTGGTAGTCCATGCCGTAAACGTTGGGCACTAGGTGT-GGGGCTCATTCCACGAGT 179 Query 365 TCCGGTGCCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGT 407 ||| ||||||||||||||||| ||||| || |||||||||| Sbjct 180 TCC-GTGCCGCAGCAAACGCATTAAGTGCCCCGCCTGGGGAGT 221 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203112286720