Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178025.1_202017-04- 25] 7,290 sequences; 12,699,436 total letters Query= AAMG01002194.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq3068 340 3e-91 seq3189 104 4e-20 >seq3068 Length=5922 Score = 340 bits (376), Expect = 3e-91 Identities = 271/322 (84%), Gaps = 3/322 (1%) Strand=Plus/Minus Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATA 60 |||||| ||||||||||||||||||| ||||||||||||||||| ||||| ||||| | Sbjct 3350 AGTGCATGTGGTGGATGCCTTGGCGATCACAGGCGATGAAGGACGCGGTAGCCTGCGAAA 3291 Query 61 AGCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGC 120 |||| ||||||| |||||| |||||||||| |||| ||||||||||||||||| Sbjct 3290 AGCTACGGGGAGCTGGCAAACGAGCTTTGATCCGTAGATGTCCGAATGGGGAAACCCACT 3231 Query 121 CCTTTGGGTCATTGCATG-CTGAATACATAGGT-ATGCAAAGCGAACGCGGCGAACTGAA 178 ||||| || | |||| ||||||||||||| |||| |||||||||||| |||||||| Sbjct 3230 CCTTTTGGAGTATCCATGGCTGAATACATAGGCCATGCGAAGCGAACGCGGTGAACTGAA 3171 Query 179 ACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAA 238 ||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3170 ACATCTAAGTAACCGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAA 3111 Query 239 ATGGGATGAGCCTT-TACGAGATAGTTGAATTGATAGTGGAATCCTCTGGAAATAGGAGC 297 |||||||||||||| || || ||| |||| ||| ||| ||||||||| | || Sbjct 3110 ATGGGATGAGCCTTGCACTCTTTATTTGTATTGTTAGCCGAACGCTCTGGAAAGTGCGGC 3051 Query 298 CATAGCGGGTGATAGCCCCGTA 319 |||||| ||||||||||| ||| Sbjct 3050 CATAGCAGGTGATAGCCCTGTA 3029 >seq3189 Length=178 Score = 104 bits (114), Expect = 4e-20 Identities = 95/120 (79%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATA 60 || ||||| ||||||||||||||| | || ||| ||||||||| ||||| ||||||| Sbjct 30 AGGGCACAGGGTGGATGCCTTGGCACTAGGAGCCGAAGAAGGACGTGGTAGCCTGCGATA 89 Query 61 AGCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGC 120 ||| ||||||| |||||| || ||||||| | ||||||||||||| ||||| || Sbjct 90 AGCCTCGGGGAGCTGGCAAACGAGCTGTGATCCGAGGGTTTCCGAATGGGGGAACCCCGC 149 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 918333048640