Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178035.1_202017-04-
25] 8,158 sequences; 13,853,465 total letters
Query= AAMG01000140.1
Length=336
Score E
Sequences producing significant alignments: (Bits) Value
seq5714 197 3e-48
seq2960 149 1e-33
>seq5714
Length=6154
Score = 197 bits (218), Expect = 3e-48
Identities = 241/325 (74%), Gaps = 9/325 (3%)
Strand=Plus/Minus
Query 11 AGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAGTGATTCG 70
||||| |||||||||| |||||| |||| || ||||| | ||||||||| || | |
Sbjct 3026 AGGGGAGTGAAATAGATCCTGAAACCGCATGCATACAAACAGTCGGAGCCTCGTAAGG-G 2968
Query 71 GTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGT-CACCAGCGAGGTTAAG 129
|||||||||| ||||||| |||||| | | ||| ||| ||| || ||| || ||||
Sbjct 2967 GTGACGGCGTACCTTTTGTATAATGGGTCAGCGACTTA--CGTTCAGTAGCAAGCTTAAC 2910
Query 130 GGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGCG 189
| | ||| || || || ||||||||| | || |||||| ||||| |||
Sbjct 2909 CGTATAGGGC-----AGGCGTAGCGAAAGCGAGTCCGAATAGGGCGTTCAGTTGCTGGGC 2855
Query 190 CTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATG 249
||||| ||||||| |||||||| ||| | |||| ||||| |||||||| ||| ||
Sbjct 2854 GTAGACCCGAAACCAGGTGATCTATCCATGGCCAGGATGAAGGTGCGGTAACACGTACTG 2795
Query 250 GAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGG 309
|||| ||||||| |||||||||||||| |||||| | || |||||||||||||
Sbjct 2794 GAGGTCCGAACCCACTAACGTTGAAAAGTTAGGGGATGAGCTGTGGATAGGGGTGAAAGG 2735
Query 310 CCAATCAAACTGGGAAATAGCTCGT 334
| || ||||| |||||||||| ||
Sbjct 2734 CTAAACAAACCTGGAAATAGCTGGT 2710
>seq2960
Length=291
Score = 149 bits (164), Expect = 1e-33
Identities = 200/269 (74%), Gaps = 17/269 (6%)
Strand=Plus/Plus
Query 1 TAGCCCGAGCAGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCC 60
|| |||| | ||||| ||||||||| |||||| ||| | |||||||| | || ||||||
Sbjct 11 TACCCCGGG-AGGGGAGTGAAATAGTACCTGAAACCGTGTGCCTACAATCCGTTGGAGCC 69
Query 61 GAGT--GATTCGGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCA 118
| | | |||||| |||||||||||| | ||||||||| ||||||||| |||
Sbjct 70 TCCTTGGCTGGGGTGACAGCGTGCCTTTTGAAGAATGAGCCTGCGAGTTAGTGCTCAGTG 129
Query 119 GCGAGGTTAAGGGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGAC- 177
|||||||||| | | || | ||||| || ||||||||| | ||||||||| |
Sbjct 130 GCGAGGTTAA-CCCGTGTGG---GGAAGCCGTAGCGAAAGCGAGTCCGAACAGGGCGCCC 185
Query 178 -GAGTTGGTGGCGCTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGC- 235
||| | ||| |||||| |||| | |||||||| ||| | ||||||||||| |||
Sbjct 186 ATAGTCGCTGGGTCTAGACCCGAAGCGAAGTGATCTAGCCATGGGCAGGTTGAAG-CGCG 244
Query 236 GGTAA---CGCGTGATGGAGGACCGAACC 261
||||| |||| ||||||||||||||
Sbjct 245 GGTAAGACCGCG---TGGAGGACCGAACC 270
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 972720638976
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |