Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178035.1_202017-04- 25] 8,158 sequences; 13,853,465 total letters Query= AAMG01001178.1 Length=367 Score E Sequences producing significant alignments: (Bits) Value seq5714 363 3e-98 seq3228 167 5e-39 >seq5714 Length=6154 Score = 363 bits (402), Expect = 3e-98 Identities = 286/338 (85%), Gaps = 6/338 (2%) Strand=Plus/Plus Query 1 CTTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCC 60 |||||||| |||||| ||||||| |||||||||||||||| ||||||||||||||||||| Sbjct 5460 CTTTACAACCCGAAGGCCTTCTT-CACACACGCGGCATTG-CTGGATCAGGCTTTCGCCC 5517 Query 61 ATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAG 120 ||||||||| |||||||||||||||||||||||||||||||| |||||||||||| |||| Sbjct 5518 ATTGTCCAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAG 5577 Query 121 TGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCA 180 |||| ||| || |||||||||||||| ||| ||||||||||||||| ||| ||||| || Sbjct 5578 TGTGGCTGGTCGTCCTCTCAGACCAGCTACTGATCGTCGCCTTGGTAGGCCTTTACCCCA 5637 Query 181 CCAACTAGCTAATCCGACCTAGGCTCATCTGATAGCGCAAGGCCCGAAGGTCCCCTGCTT 240 |||||||||||||| | | | ||| | | ||||||| |||||||||||||||| |||| Sbjct 5638 CCAACTAGCTAATCAGCCATCGGCCAACCCTATAGCGCGAGGCCCGAAGGTCCCCCGCTT 5697 Query 241 TCTCCCGTAGGACGTATGCGGTATTAGCGTCCG--TTTCCGAACGTTATCCCCCACTACC 298 || |||||| |||||||||||||| |||| |||| | ||||||||||||| Sbjct 5698 TCATCCGTAGATCGTATGCGGTATTA--ATCCGGCTTTCGCCGGGCTATCCCCCACTACA 5755 Query 299 AGGCAGATTCCTAGGCATTACTCACCCGTCCGCCGCTC 336 | || |||| | | ||||||||||||| |||| ||| Sbjct 5756 GGACATGTTCCGATGTATTACTCACCCGTTCGCCACTC 5793 >seq3228 Length=667 Score = 167 bits (184), Expect = 5e-39 Identities = 128/149 (86%), Gaps = 2/149 (1%) Strand=Plus/Plus Query 2 TTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCA 61 ||||||| |||||| ||||| | | | |||||||| | | ||| |||||||||||||||| Sbjct 514 TTTACAACCCGAAGGCCTTCATCC-CTCACGCGGCGTCG-CTGCATCAGGCTTTCGCCCA 571 Query 62 TTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGT 121 |||| |||||||||||||||||||||||||||||||||||| |||||||||||| ||||| Sbjct 572 TTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGT 631 Query 122 GTGACTGATCATCCTCTCAGACCAGTTAC 150 ||| | | || |||||||| || | ||| Sbjct 632 GTGGCCGGTCGCCCTCTCAGGCCGGCTAC 660 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1071912546240