Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178035.1_202017-04-
25] 8,158 sequences; 13,853,465 total letters
Query= AAMG01001178.1
Length=367
Score E
Sequences producing significant alignments: (Bits) Value
seq5714 363 3e-98
seq3228 167 5e-39
>seq5714
Length=6154
Score = 363 bits (402), Expect = 3e-98
Identities = 286/338 (85%), Gaps = 6/338 (2%)
Strand=Plus/Plus
Query 1 CTTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCC 60
|||||||| |||||| ||||||| |||||||||||||||| |||||||||||||||||||
Sbjct 5460 CTTTACAACCCGAAGGCCTTCTT-CACACACGCGGCATTG-CTGGATCAGGCTTTCGCCC 5517
Query 61 ATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAG 120
||||||||| |||||||||||||||||||||||||||||||| |||||||||||| ||||
Sbjct 5518 ATTGTCCAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAG 5577
Query 121 TGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCA 180
|||| ||| || |||||||||||||| ||| ||||||||||||||| ||| ||||| ||
Sbjct 5578 TGTGGCTGGTCGTCCTCTCAGACCAGCTACTGATCGTCGCCTTGGTAGGCCTTTACCCCA 5637
Query 181 CCAACTAGCTAATCCGACCTAGGCTCATCTGATAGCGCAAGGCCCGAAGGTCCCCTGCTT 240
|||||||||||||| | | | ||| | | ||||||| |||||||||||||||| ||||
Sbjct 5638 CCAACTAGCTAATCAGCCATCGGCCAACCCTATAGCGCGAGGCCCGAAGGTCCCCCGCTT 5697
Query 241 TCTCCCGTAGGACGTATGCGGTATTAGCGTCCG--TTTCCGAACGTTATCCCCCACTACC 298
|| |||||| |||||||||||||| |||| |||| | |||||||||||||
Sbjct 5698 TCATCCGTAGATCGTATGCGGTATTA--ATCCGGCTTTCGCCGGGCTATCCCCCACTACA 5755
Query 299 AGGCAGATTCCTAGGCATTACTCACCCGTCCGCCGCTC 336
| || |||| | | ||||||||||||| |||| |||
Sbjct 5756 GGACATGTTCCGATGTATTACTCACCCGTTCGCCACTC 5793
>seq3228
Length=667
Score = 167 bits (184), Expect = 5e-39
Identities = 128/149 (86%), Gaps = 2/149 (1%)
Strand=Plus/Plus
Query 2 TTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCA 61
||||||| |||||| ||||| | | | |||||||| | | ||| ||||||||||||||||
Sbjct 514 TTTACAACCCGAAGGCCTTCATCC-CTCACGCGGCGTCG-CTGCATCAGGCTTTCGCCCA 571
Query 62 TTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGT 121
|||| |||||||||||||||||||||||||||||||||||| |||||||||||| |||||
Sbjct 572 TTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGT 631
Query 122 GTGACTGATCATCCTCTCAGACCAGTTAC 150
||| | | || |||||||| || | |||
Sbjct 632 GTGGCCGGTCGCCCTCTCAGGCCGGCTAC 660
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1071912546240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |