Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178035.1_202017-04-
25] 8,158 sequences; 13,853,465 total letters
Query= AAMG01001291.1
Length=420
Score E
Sequences producing significant alignments: (Bits) Value
seq5714 430 3e-118
seq2960 181 3e-43
>seq5714
Length=6154
Score = 430 bits (476), Expect = 3e-118
Identities = 353/415 (85%), Gaps = 12/415 (3%)
Strand=Plus/Plus
Query 4 CCGATCCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAG 63
|| |||||||| |||| || ||||||||| ||||| |||| ||||||| |||||||| |
Sbjct 2744 CCTATCCACAGCTCATCCC-CTAACTTTT-CAACGTTAGTGGGTTCGGACCTCCAGTACG 2801
Query 64 TAGTTACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTC 123
| |||||| ||||| || |||| |||| ||||||||| || ||||| |||||||| |
Sbjct 2802 T-GTTACCGCACCTT-CATCCTGGCCAT-GGATAGATCACCTGGTTT-CGGGTCTACG-C 2856
Query 124 CCAGCGACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTATTCGGTTAAG 183
||||| ||| |||||||| | |||||||||| |||||||||| |||||| ||||||||
Sbjct 2857 CCAGCAACTGAACGCCCTATTCGGACTCGCTTT-CGCTACGCCTGCCCTATACGGTTAAG 2915
Query 184 CTTTGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAA 243
||| || |||||| |||||||||||||||||||||||||||||||| ||||||| |
Sbjct 2916 CTT-GCTACTGAACGTAAGTCGCTGACCCATTATACAAAAGGTACGCCGTCACCC--CTT 2972
Query 244 AGTGGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGG 303
| |||||| |||| ||||| |||| |||||||||||||||||||||||||||| ||||
Sbjct 2973 ACGAGGCTCCGACTGTTTGTATGCATGCGGTTTCAGGATCTATTTCACTCCCCTC-CCGG 3031
Query 304 GGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAG 363
||||||||||||||||||||||||||||| |||||||||||||| ||| |||||||||
Sbjct 3032 GGTTCTTTTCGCCTTTCCCTCACGGTACTGGTTCACTATCGGTCGATCACGAGTATTTAG 3091
Query 364 CCTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACT 418
|||||||||||||||||||||| |||||||| |||| |||| ||| ||||||
Sbjct 3092 CCTTGGAGGATGGTCCCCCCATCTTCAGACAGGATTTCACGTGTCCCGCCCTACT 3146
>seq2960
Length=291
Score = 181 bits (200), Expect = 3e-43
Identities = 223/292 (76%), Gaps = 11/292 (4%)
Strand=Plus/Minus
Query 30 TTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTTACCCAACCTTTCAACCTGCCC 89
|||||||| | || |||||||||||||| || |||||| ||| ||||||||||
Sbjct 285 TTTTCAACCCTGGTGGGTTCGGTCCTCCACGCGGTC-TTACCCGCGCTT-CAACCTGCCC 228
Query 90 ATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGCGACTA--GACGCCCTAGTAAG 147
|| || |||||| | | || |||||||| ||||||||||| | |||||| | |
Sbjct 227 AT-GGCTAGATCACTTCGCTT-CGGGTCTAGA-CCCAGCGACTATGGGCGCCCTGTTCGG 171
Query 148 ACTCGCTTTTCGCTACGCCTCCCCTATTCGGTTAAGCTTTGCCACTGAAAA-TAAGTCGC 206
||||||||| ||||||| || ||| | ||| | | | | |||||||| | ||| ||||
Sbjct 170 ACTCGCTTT-CGCTACGGCTTCCCCACACGGGTTAACCTCGCCACTGAGCACTAACTCGC 112
Query 207 TGACCCATTATACAAAAGGTACGCAGTCACCCAA-CAAAGTGGGCTCCCACTGCTTGTAC 265
| | |||| | ||||||| |||| ||||||| | | ||| |||||| || | |||||
Sbjct 111 AGGCTCATTCTTCAAAAGGCACGCTGTCACCCCAGCCAAGGAGGCTCCAACGGATTGTAG 52
Query 266 GCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCT 317
||| ||||||||||| |||||||||||||||| ||||||| |||||| |||
Sbjct 51 GCACACGGTTTCAGGTACTATTTCACTCCCCTC-CCGGGGTACTTTTCACCT 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1241498710272
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |