Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178035.1_202017-04-
25] 8,158 sequences; 13,853,465 total letters
Query= AAMG01001752.1
Length=400
Score E
Sequences producing significant alignments: (Bits) Value
seq7145 196 1e-47
seq8098 187 6e-45
seq5714 168 2e-39
>seq7145
Length=207
Score = 196 bits (216), Expect = 1e-47
Identities = 155/186 (83%), Gaps = 0/186 (0%)
Strand=Plus/Plus
Query 8 GCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACCCTGGAAC 67
||||||||||||||||||||| ||||||| ||||||||| || ||| || |||||||||
Sbjct 1 GCCTGTCGGCCTCGCCTTAGGTCCCGACTTACCCAGGGCGGATTAACCTGGCCCTGGAAC 60
Query 68 CCTTGGATAATCGGCGGACGGGATTCCCACCCGTCACACGCTACTCATGCCTGCATTCTC 127
|||||| | |||||||||||| ||| |||||||| ||||||||||||||||||||||
Sbjct 61 CCTTGGTCATTCGGCGGACGGGTTTCTCACCCGTCTTTCGCTACTCATGCCTGCATTCTC 120
Query 128 ACTCGCATCAACTCCACCACACAGTCACCCGGCAGCTTCACCACTGACACGACGCTCCCC 187
||||| | ||||||| | || ||| || |||||||| | ||||||||||||||
Sbjct 121 ACTCGTGTGGGCTCCACCGCTGGGTTCCCCCGCGGCTTCACCGCCCACACGACGCTCCCC 180
Query 188 TACCCA 193
||||||
Sbjct 181 TACCCA 186
>seq8098
Length=219
Score = 187 bits (206), Expect = 6e-45
Identities = 124/135 (92%), Gaps = 2/135 (1%)
Strand=Plus/Minus
Query 267 GTGAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTA 326
|||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||
Sbjct 219 GTGAGCTATTACGCACTCTTTCAAGGGTGGCTGCTTCTAAGCCAACCTCCTGGTTGTCTG 160
Query 327 CGCAACTCCACATCCTTTCCCACTGAGTCAC-CACTTAGGGGCCTTAGCTGATGATCTGG 385
||||||||||||||||||||||| || ||| | ||||||||||||||| | || |||||
Sbjct 159 TGCAACTCCACATCCTTTCCCACTTAG-CACACGCTTAGGGGCCTTAGCCGGTGGTCTGG 101
Query 386 GCTGTTTCCCTCTCG 400
|||||||||||||||
Sbjct 100 GCTGTTTCCCTCTCG 86
>seq5714
Length=6154
Score = 168 bits (186), Expect = 2e-39
Identities = 285/406 (70%), Gaps = 19/406 (5%)
Strand=Plus/Plus
Query 4 CTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACCCTG 63
|||||| | || ||||||||||||| ||||||||||| || || ||| | | |
Sbjct 2150 CTACGCATTTCTGCCTCGCCTTAGGGGCCGACTCACCCTACGCCGATGAACGTTGCGTAG 2209
Query 64 GAACCCTTGGATAATCGGCGGACGGGA--TTCCCACCCGTCACACGCTACTCATGCCTGC 121
||| |||||| ||||| ||| ||| | ||| | | ||||||||||| | ||
Sbjct 2210 GAAACCTTGGGCTTACGGCGAGGGGGCCTTTCACCCCCTTTAT-CGCTACTCATGTCAGC 2268
Query 122 ATTCTCACTCGCATCAACTCCACCACACAGTCACCCGGCAGCTTCACCA-CTGACACGAC 180
|||| |||| | | ||||| ||| | | || |||| |||| | || || ||
Sbjct 2269 ATTCGCACTTCCGATACCTCCAGCACCCTTT-ACAAGGCACCTTCGCAGGCTTACGGAAC 2327
Query 181 GCTCCCCTACCC--------AACCACACAGGTTGCCACAGCTTCGGCGGATAACTTAAGC 232
|||| |||||| || ||| || || ||||||||| ||| |||| ||
Sbjct 2328 GCTCTCCTACCATGCGTGCTAAGCACGCAT----CCGCAGCTTCGGTATATAGCTTA-GC 2382
Query 233 CCCGCTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCAAGG 292
|||| ||||| || |||| | | ||| || |||||||||||||||| ||||| ||||
Sbjct 2383 CCCGTTACATCTTCCGCGCAGGACGACTCGATCAGTGAGCTATTACGCTTTCTTTAAAGG 2442
Query 293 ATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCACTGA 352
|||||||||| |||||||||||||| ||| | || |||| || ||||||||| |
Sbjct 2443 GTGGCTGCTTCTAAGCCAACCTCCTGACTGTTTTAGCCTTCCCACTTCGTTTCCCACTTA 2502
Query 353 GTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCT 398
| | | || ||| ||||||||| | |||||| |||||||||||
Sbjct 2503 G-CTATATTTGGGGACCTTAGCTGGCGGTCTGGGTTGTTTCCCTCT 2547
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1177503931392
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |