Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178035.1_202017-04- 25] 8,158 sequences; 13,853,465 total letters Query= AAMG01001752.1 Length=400 Score E Sequences producing significant alignments: (Bits) Value seq7145 196 1e-47 seq8098 187 6e-45 seq5714 168 2e-39 >seq7145 Length=207 Score = 196 bits (216), Expect = 1e-47 Identities = 155/186 (83%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 8 GCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACCCTGGAAC 67 ||||||||||||||||||||| ||||||| ||||||||| || ||| || ||||||||| Sbjct 1 GCCTGTCGGCCTCGCCTTAGGTCCCGACTTACCCAGGGCGGATTAACCTGGCCCTGGAAC 60 Query 68 CCTTGGATAATCGGCGGACGGGATTCCCACCCGTCACACGCTACTCATGCCTGCATTCTC 127 |||||| | |||||||||||| ||| |||||||| |||||||||||||||||||||| Sbjct 61 CCTTGGTCATTCGGCGGACGGGTTTCTCACCCGTCTTTCGCTACTCATGCCTGCATTCTC 120 Query 128 ACTCGCATCAACTCCACCACACAGTCACCCGGCAGCTTCACCACTGACACGACGCTCCCC 187 ||||| | ||||||| | || ||| || |||||||| | |||||||||||||| Sbjct 121 ACTCGTGTGGGCTCCACCGCTGGGTTCCCCCGCGGCTTCACCGCCCACACGACGCTCCCC 180 Query 188 TACCCA 193 |||||| Sbjct 181 TACCCA 186 >seq8098 Length=219 Score = 187 bits (206), Expect = 6e-45 Identities = 124/135 (92%), Gaps = 2/135 (1%) Strand=Plus/Minus Query 267 GTGAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTA 326 |||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| Sbjct 219 GTGAGCTATTACGCACTCTTTCAAGGGTGGCTGCTTCTAAGCCAACCTCCTGGTTGTCTG 160 Query 327 CGCAACTCCACATCCTTTCCCACTGAGTCAC-CACTTAGGGGCCTTAGCTGATGATCTGG 385 ||||||||||||||||||||||| || ||| | ||||||||||||||| | || ||||| Sbjct 159 TGCAACTCCACATCCTTTCCCACTTAG-CACACGCTTAGGGGCCTTAGCCGGTGGTCTGG 101 Query 386 GCTGTTTCCCTCTCG 400 ||||||||||||||| Sbjct 100 GCTGTTTCCCTCTCG 86 >seq5714 Length=6154 Score = 168 bits (186), Expect = 2e-39 Identities = 285/406 (70%), Gaps = 19/406 (5%) Strand=Plus/Plus Query 4 CTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACCCTG 63 |||||| | || ||||||||||||| ||||||||||| || || ||| | | | Sbjct 2150 CTACGCATTTCTGCCTCGCCTTAGGGGCCGACTCACCCTACGCCGATGAACGTTGCGTAG 2209 Query 64 GAACCCTTGGATAATCGGCGGACGGGA--TTCCCACCCGTCACACGCTACTCATGCCTGC 121 ||| |||||| ||||| ||| ||| | ||| | | ||||||||||| | || Sbjct 2210 GAAACCTTGGGCTTACGGCGAGGGGGCCTTTCACCCCCTTTAT-CGCTACTCATGTCAGC 2268 Query 122 ATTCTCACTCGCATCAACTCCACCACACAGTCACCCGGCAGCTTCACCA-CTGACACGAC 180 |||| |||| | | ||||| ||| | | || |||| |||| | || || || Sbjct 2269 ATTCGCACTTCCGATACCTCCAGCACCCTTT-ACAAGGCACCTTCGCAGGCTTACGGAAC 2327 Query 181 GCTCCCCTACCC--------AACCACACAGGTTGCCACAGCTTCGGCGGATAACTTAAGC 232 |||| |||||| || ||| || || ||||||||| ||| |||| || Sbjct 2328 GCTCTCCTACCATGCGTGCTAAGCACGCAT----CCGCAGCTTCGGTATATAGCTTA-GC 2382 Query 233 CCCGCTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCAAGG 292 |||| ||||| || |||| | | ||| || |||||||||||||||| ||||| |||| Sbjct 2383 CCCGTTACATCTTCCGCGCAGGACGACTCGATCAGTGAGCTATTACGCTTTCTTTAAAGG 2442 Query 293 ATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCACTGA 352 |||||||||| |||||||||||||| ||| | || |||| || ||||||||| | Sbjct 2443 GTGGCTGCTTCTAAGCCAACCTCCTGACTGTTTTAGCCTTCCCACTTCGTTTCCCACTTA 2502 Query 353 GTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCT 398 | | | || ||| ||||||||| | |||||| ||||||||||| Sbjct 2503 G-CTATATTTGGGGACCTTAGCTGGCGGTCTGGGTTGTTTCCCTCT 2547 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1177503931392