Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178035.1_202017-04- 25] 8,158 sequences; 13,853,465 total letters Query= AAMG01001962.1 Length=275 Score E Sequences producing significant alignments: (Bits) Value seq5218 289 4e-76 seq5714 271 1e-70 >seq5218 Length=428 Score = 289 bits (320), Expect = 4e-76 Identities = 211/245 (86%), Gaps = 0/245 (0%) Strand=Plus/Plus Query 8 GGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGCTATGC 67 |||||| |||||||||| |||||| ||||||||||| ||| |||| ||||| ||| Sbjct 184 GGCTTCCCGCTTAGATGCTTTCAGCGGTTATCCCTTCCGAACGTAGCCAACCAGCGGTGC 243 Query 68 ACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGA 127 | |||| | |||||||| ||||||||||| |||| ||||||||||||||||||| ||| Sbjct 244 TCCTGGCGGAACAACTGGCACACCAGAGGTTCGTCCGTCCCGGTCCTCTCGTACTAGGGA 303 Query 128 CAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTT 187 |||| | |||||| |||||| ||| | | |||||||||||||||||||||| ||||||| Sbjct 304 CAGCCCTTCTCAAGTTTCCTGCGCGCGCAGCGGATAGGGACCGAACTGTCTCACGACGTT 363 Query 188 CTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTC 247 || |||||||||||||| || ||||||||||||||||||||||||||||||||||||| | Sbjct 364 CTAAACCCAGCTCGCGTACCGCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTCC 423 Query 248 AGCCC 252 ||||| Sbjct 424 AGCCC 428 >seq5714 Length=6154 Score = 271 bits (300), Expect = 1e-70 Identities = 224/273 (82%), Gaps = 0/273 (0%) Strand=Plus/Plus Query 3 AGGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGC 62 ||| | | ||| |||||||||| |||||| ||||| ||||| ||| ||||| ||| || Sbjct 766 AGGCGAGTTTCCCGCTTAGATGCTTTCAGCGGTTATCTCTTCCGAACATAGCTACCCGGC 825 Query 63 TATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACT 122 |||| |||| ||||| ||| ||||||||||| ||||| |||||||||||||||| Sbjct 826 GATGCCACTGGCGTGACAACCGGTACACCAGAGGTTCGTCCACTCCGGTCCTCTCGTACT 885 Query 123 AAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCG 182 | | |||| || |||||| ||| ||||||||| | |||||||||| ||||||||| || Sbjct 886 AGGAGCAGCCCCCTTCAAATATCCAACGCCCACGGCAGATAGGGACCAAACTGTCTCACG 945 Query 183 ACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCT 242 ||||| | |||||||||| ||| ||||||||| ||||||||||| |||||||||||| Sbjct 946 ACGTTTTAAACCCAGCTCACGTACCTCTTTAAATGGCGAACAGCCATACCCTTGGGACCG 1005 Query 243 ACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 || |||||||||||||||| |||||||||||| Sbjct 1006 GCTACAGCCCCAGGATGAGATGAGCCGACATCG 1038 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 780738292888