Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178035.1_202017-04- 25] 8,158 sequences; 13,853,465 total letters Query= AAMG01002180.1 Length=500 Score E Sequences producing significant alignments: (Bits) Value seq3228 347 4e-93 seq5714 338 2e-90 >seq3228 Length=667 Score = 347 bits (384), Expect = 4e-93 Identities = 250/287 (87%), Gaps = 6/287 (2%) Strand=Plus/Minus Query 211 GTAGCCGACCTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTAC 270 ||||||| |||||||||| || |||||||| ||| |||||||||||| ||| |||||||| Sbjct 660 GTAGCCGGCCTGAGAGGGCGACCGGCCACACTGGGACTGAGACACGGCCCAGACTCCTAC 601 Query 271 GGGAGGCAGCAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGT 330 |||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| Sbjct 600 GGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGATGCAGCGACGCCGCGT 541 Query 331 GAGCGATGAAGGCCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGA-----TAATGACGG 385 ||| ||||||||||||||||| ||||| |||| || || |||||| | |||||| Sbjct 540 GAGGGATGAAGGCCTTCGGGTTGTAAACCTCTTTCAGCAGGGAAGAAGCGCAAGTGACGG 481 Query 386 TACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGC 445 ||| || || ||||| |||||||||||||||||||||||||||||||||||||||| || Sbjct 480 TACCTGCAGAAGAAGCGCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGCGC 421 Query 446 TAGCGTTATCCGGAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTT 492 |||||| |||||||||| | |||||||||| | |||||| ||||| Sbjct 420 AAGCGTTGTCCGGAATTA-TTGGGCGTAAAGAGCTCGTAGGCGGTTT 375 >seq5714 Length=6154 Score = 338 bits (374), Expect = 2e-90 Identities = 289/359 (81%), Gaps = 26/359 (7%) Strand=Plus/Minus Query 165 CTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACCTGAG 224 ||||||||||||||||| ||||| ||| |||||||||||||||||||||| | ||||| Sbjct 5653 CTGATTAGCTAGTTGGTGGGGTAAAGGCCTACCAAGGCGACGATCAGTAGCTGGTCTGAG 5594 Query 225 AGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGTG 284 ||| || | |||||| ||| |||||||||||| ||| |||||||||||||||||||||| Sbjct 5593 AGGACGACCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAGCAGTG 5534 Query 285 GGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAAGGCC 344 |||||| ||| ||||||||| |||||||||| |||||| |||||||| | || ||||||| Sbjct 5533 GGGAATTTTGGACAATGGGCGAAAGCCTGATCCAGCAATGCCGCGTGTGTGAAGAAGGCC 5474 Query 345 TTCGGGTCGTAAAGC---TCTGTCCTCAAGGAA------------GATA----------A 379 ||||||| ||||||| | ||||| || ||| ||| | Sbjct 5473 TTCGGGTTGTAAAGCACTTTTGTCCGGAAAGAAATCCTTGGCTCTAATACAGTCGGGGGA 5414 Query 380 TGACGGTACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTA 439 ||||||||| || || |||| ||||||||||||||||||||||||||||||||||||| Sbjct 5413 TGACGGTACCGGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTA 5354 Query 440 GGGGGCTAGCGTTATCCGGAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAG 498 ||| || ||||||| |||||||||| |||||||||| ||||| ||| ||||| |||| Sbjct 5353 GGGTGCGAGCGTTAATCGGAATTACT-GGGCGTAAAGCGTGCGCAGGCGGTTTGCTAAG 5296 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1497477825792