Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178035.1_202017-04-
25] 8,158 sequences; 13,853,465 total letters
Query= AAMG01002180.1
Length=500
Score E
Sequences producing significant alignments: (Bits) Value
seq3228 347 4e-93
seq5714 338 2e-90
>seq3228
Length=667
Score = 347 bits (384), Expect = 4e-93
Identities = 250/287 (87%), Gaps = 6/287 (2%)
Strand=Plus/Minus
Query 211 GTAGCCGACCTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTAC 270
||||||| |||||||||| || |||||||| ||| |||||||||||| ||| ||||||||
Sbjct 660 GTAGCCGGCCTGAGAGGGCGACCGGCCACACTGGGACTGAGACACGGCCCAGACTCCTAC 601
Query 271 GGGAGGCAGCAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGT 330
|||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||
Sbjct 600 GGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGATGCAGCGACGCCGCGT 541
Query 331 GAGCGATGAAGGCCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGA-----TAATGACGG 385
||| ||||||||||||||||| ||||| |||| || || |||||| | ||||||
Sbjct 540 GAGGGATGAAGGCCTTCGGGTTGTAAACCTCTTTCAGCAGGGAAGAAGCGCAAGTGACGG 481
Query 386 TACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGC 445
||| || || ||||| |||||||||||||||||||||||||||||||||||||||| ||
Sbjct 480 TACCTGCAGAAGAAGCGCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGCGC 421
Query 446 TAGCGTTATCCGGAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTT 492
|||||| |||||||||| | |||||||||| | |||||| |||||
Sbjct 420 AAGCGTTGTCCGGAATTA-TTGGGCGTAAAGAGCTCGTAGGCGGTTT 375
>seq5714
Length=6154
Score = 338 bits (374), Expect = 2e-90
Identities = 289/359 (81%), Gaps = 26/359 (7%)
Strand=Plus/Minus
Query 165 CTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACCTGAG 224
||||||||||||||||| ||||| ||| |||||||||||||||||||||| | |||||
Sbjct 5653 CTGATTAGCTAGTTGGTGGGGTAAAGGCCTACCAAGGCGACGATCAGTAGCTGGTCTGAG 5594
Query 225 AGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGTG 284
||| || | |||||| ||| |||||||||||| ||| ||||||||||||||||||||||
Sbjct 5593 AGGACGACCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAGCAGTG 5534
Query 285 GGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAAGGCC 344
|||||| ||| ||||||||| |||||||||| |||||| |||||||| | || |||||||
Sbjct 5533 GGGAATTTTGGACAATGGGCGAAAGCCTGATCCAGCAATGCCGCGTGTGTGAAGAAGGCC 5474
Query 345 TTCGGGTCGTAAAGC---TCTGTCCTCAAGGAA------------GATA----------A 379
||||||| ||||||| | ||||| || ||| ||| |
Sbjct 5473 TTCGGGTTGTAAAGCACTTTTGTCCGGAAAGAAATCCTTGGCTCTAATACAGTCGGGGGA 5414
Query 380 TGACGGTACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTA 439
||||||||| || || |||| |||||||||||||||||||||||||||||||||||||
Sbjct 5413 TGACGGTACCGGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTA 5354
Query 440 GGGGGCTAGCGTTATCCGGAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAG 498
||| || ||||||| |||||||||| |||||||||| ||||| ||| ||||| ||||
Sbjct 5353 GGGTGCGAGCGTTAATCGGAATTACT-GGGCGTAAAGCGTGCGCAGGCGGTTTGCTAAG 5296
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1497477825792
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |