Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178035.1_202017-04- 25] 8,158 sequences; 13,853,465 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq3228 363 4e-98 seq5714 324 3e-86 >seq3228 Length=667 Score = 363 bits (402), Expect = 4e-98 Identities = 329/411 (80%), Gaps = 5/411 (1%) Strand=Plus/Minus Query 1 TACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGC 60 ||| || || ||||| |||||||||||||||||||||||||||||||||||||||| || Sbjct 480 TACCTGCAGAAGAAGCGCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGCGC 421 Query 61 TAGCGTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGT 120 |||||| |||||||||| ||||||||||| | |||||| ||||| | ||| | || Sbjct 420 AAGCGTTGTCCGGAATTATTGGGCGTAAAGAGCTCGTAGGCGGTTTGTCGCGTCTGGTGT 361 Query 121 GAAAGGCTATGGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGG 180 |||| ||||||||| || | ||| | | || | | ||||||||| | ||| Sbjct 360 GAAAACTCGAGGCTCAACCTCGAGCTTGCATCGGGTACGGGCAGACTAGAGTGCGGTAGG 301 Query 181 GGCAAGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGG 240 || | |||||||||| ||||||||||| |||||| |||||| |||||||||||| ||| Sbjct 300 GGAGACTGGAATTCCTGGTGTAGCGGTGGAATGCGCAGATATCAGGAGGAACACCGATGG 241 Query 241 CGAAGGCGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAG 300 ||||||| | | |||| | | ||||||| |||||| ||||||| |||||||| ||||| Sbjct 240 CGAAGGCAGGTCTCTGGGCCGCAACTGACGCTGAGGAGCGAAAGCATGGGGAGCGAACAG 181 Query 301 GATTAGATACCCTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCAT-- 358 |||||||||||||||||||||| |||||||||| || ||||||||| ||||| ||| Sbjct 180 GATTAGATACCCTGGTAGTCCATGCCGTAAACGTTGGGCACTAGGTGT-GGGGCTCATTC 122 Query 359 -AAGTGCTCCGGTGCCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408 | | | ||| ||||||||||||||||| ||||| || ||||||||||| Sbjct 121 CACGAGTTCC-GTGCCGCAGCAAACGCATTAAGTGCCCCGCCTGGGGAGTA 72 >seq5714 Length=6154 Score = 324 bits (358), Expect = 3e-86 Identities = 279/344 (81%), Gaps = 6/344 (2%) Strand=Plus/Minus Query 13 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 72 |||| |||||||||||||||||||||||||||||||||||||||| || ||||||| || Sbjct 5395 AAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCGAGCGTTAATCG 5336 Query 73 GAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGG 132 |||||||||||||||||| ||||| ||| ||||| |||| | || |||||| | || Sbjct 5335 GAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTTGCTAAGACCGATGTGAAATCCCCGGG 5276 Query 133 CTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGT---GCAGGAGGGGCAAGTGG 189 ||||||| || ||||| || | |||| ||||||||| |||| |||| || | Sbjct 5275 CTCAACCTGGGAACTGCATTGGTGACTGGCAGGCTAGAGTATGGCAGAGGGGG---GTAG 5219 Query 190 AATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGG 249 |||||| ||||||| |||||||||||||| || ||||||| ||| |||||||||| | Sbjct 5218 AATTCCACGTGTAGCAGTGAAATGCGTAGAGATGTGGAGGAATACCGATGGCGAAGGCAG 5159 Query 250 CTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATA 309 | |||| | |||||| || | || ||||||||||||||||||||||||||||||| Sbjct 5158 CCCCCTGGGCCAATACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGATA 5099 Query 310 CCCTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGG 353 ||||||||||||||||| ||||||||| ||||| ||| |||| Sbjct 5098 CCCTGGTAGTCCACGCCCTAAACGATGTCAACTAGTTGTTGGGG 5055 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203101842944