Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178035.1_202017-04-
25] 8,158 sequences; 13,853,465 total letters
Query= AAMG01002183.1
Length=408
Score E
Sequences producing significant alignments: (Bits) Value
seq3228 363 4e-98
seq5714 324 3e-86
>seq3228
Length=667
Score = 363 bits (402), Expect = 4e-98
Identities = 329/411 (80%), Gaps = 5/411 (1%)
Strand=Plus/Minus
Query 1 TACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGC 60
||| || || ||||| |||||||||||||||||||||||||||||||||||||||| ||
Sbjct 480 TACCTGCAGAAGAAGCGCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGCGC 421
Query 61 TAGCGTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGT 120
|||||| |||||||||| ||||||||||| | |||||| ||||| | ||| | ||
Sbjct 420 AAGCGTTGTCCGGAATTATTGGGCGTAAAGAGCTCGTAGGCGGTTTGTCGCGTCTGGTGT 361
Query 121 GAAAGGCTATGGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGG 180
|||| ||||||||| || | ||| | | || | | ||||||||| | |||
Sbjct 360 GAAAACTCGAGGCTCAACCTCGAGCTTGCATCGGGTACGGGCAGACTAGAGTGCGGTAGG 301
Query 181 GGCAAGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGG 240
|| | |||||||||| ||||||||||| |||||| |||||| |||||||||||| |||
Sbjct 300 GGAGACTGGAATTCCTGGTGTAGCGGTGGAATGCGCAGATATCAGGAGGAACACCGATGG 241
Query 241 CGAAGGCGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAG 300
||||||| | | |||| | | ||||||| |||||| ||||||| |||||||| |||||
Sbjct 240 CGAAGGCAGGTCTCTGGGCCGCAACTGACGCTGAGGAGCGAAAGCATGGGGAGCGAACAG 181
Query 301 GATTAGATACCCTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCAT-- 358
|||||||||||||||||||||| |||||||||| || ||||||||| ||||| |||
Sbjct 180 GATTAGATACCCTGGTAGTCCATGCCGTAAACGTTGGGCACTAGGTGT-GGGGCTCATTC 122
Query 359 -AAGTGCTCCGGTGCCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408
| | | ||| ||||||||||||||||| ||||| || |||||||||||
Sbjct 121 CACGAGTTCC-GTGCCGCAGCAAACGCATTAAGTGCCCCGCCTGGGGAGTA 72
>seq5714
Length=6154
Score = 324 bits (358), Expect = 3e-86
Identities = 279/344 (81%), Gaps = 6/344 (2%)
Strand=Plus/Minus
Query 13 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 72
|||| |||||||||||||||||||||||||||||||||||||||| || ||||||| ||
Sbjct 5395 AAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCGAGCGTTAATCG 5336
Query 73 GAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGG 132
|||||||||||||||||| ||||| ||| ||||| |||| | || |||||| | ||
Sbjct 5335 GAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTTGCTAAGACCGATGTGAAATCCCCGGG 5276
Query 133 CTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGT---GCAGGAGGGGCAAGTGG 189
||||||| || ||||| || | |||| ||||||||| |||| |||| || |
Sbjct 5275 CTCAACCTGGGAACTGCATTGGTGACTGGCAGGCTAGAGTATGGCAGAGGGGG---GTAG 5219
Query 190 AATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGG 249
|||||| ||||||| |||||||||||||| || ||||||| ||| |||||||||| |
Sbjct 5218 AATTCCACGTGTAGCAGTGAAATGCGTAGAGATGTGGAGGAATACCGATGGCGAAGGCAG 5159
Query 250 CTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATA 309
| |||| | |||||| || | || |||||||||||||||||||||||||||||||
Sbjct 5158 CCCCCTGGGCCAATACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGATA 5099
Query 310 CCCTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGG 353
||||||||||||||||| ||||||||| ||||| ||| ||||
Sbjct 5098 CCCTGGTAGTCCACGCCCTAAACGATGTCAACTAGTTGTTGGGG 5055
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203101842944
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |