Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178035.1_202017-04- 25] 8,158 sequences; 13,853,465 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq5714 477 3e-132 seq2961 116 1e-23 seq2960 116 1e-23 seq8098 93.3 1e-16 >seq5714 Length=6154 Score = 477 bits (528), Expect = 3e-132 Identities = 430/529 (81%), Gaps = 10/529 (2%) Strand=Plus/Minus Query 2 CGAGTCCGAACAGGGCGA-CAGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCAT 60 |||||||||| |||||| |||| |||||| ||||||||||||||| |||||||| |||| Sbjct 2885 CGAGTCCGAATAGGGCGTTCAGTTGCTGGGCGTAGACCCGAAACCAGGTGATCTATCCAT 2826 Query 61 GGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAAT 120 |||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| | Sbjct 2825 GGCCAGGATGAAGGTGCGGTAACACGTACTGGAGGTCCGAACCCACTAACGTTGAAAAGT 2766 Query 121 TAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTC 180 ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| Sbjct 2765 TAGGGGATGAGCTGTGGATAGGGGTGAAAGGCTAAACAAACCTGGAAATAGCTGGTTCTC 2706 Query 181 TCCGAAAACTATTTAGGTAGTGCCTCAAGTATCACCATCGGGGGTAGAGCACTGTTATGG 240 |||||||||||||||||||||||||| || ||||| |||||||||||||||||| |||| Sbjct 2705 TCCGAAAACTATTTAGGTAGTGCCTCGTGTCTCACCTTCGGGGGTAGAGCACTGTCATGG 2646 Query 241 CTAGGGGGTC-ATTGCGACTTACCAAACCATTGCAAACTCCGAATGCGCATCAGTTTTAC 299 | ||||||| ||||| ||||| |||| ||||||||||||| | | ||| | Sbjct 2645 TTGGGGGGTCTATTGCAGATTACCCCGCCATAGCAAACTCCGAATACCGAAGAGTGCAAT 2586 Query 300 CGCGGGAGTGAGGGCAT-GGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGACTA 358 | |||||| | | ||| ||||||||| ||||| | ||||| || || || ||| Sbjct 2585 CACGGGAGACA-GACATCGGGTGCTAACGTCCGGTGTCAAGAGGGAAACAACCCAGACCG 2527 Query 359 TCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTAAGACAG 418 ||||||||| ||| |||| | |||||||| | |||||||| || ||||| |||| Sbjct 2526 CCAGCTAAGGTCCCCAAAT-ATAGCTAAGTGGGA--AACGAAGTGGGAAGGCTAAAACAG 2470 Query 419 CTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAGTCG 478 |||| |||||||| |||||||||| | |||||||| |||||| |||||||| ||| Sbjct 2469 TCAGGAGGTTGGCTTAGAAGCAGCCA-CCCTTTAAAGAAAGCGTAATAGCTCACTGATCG 2411 Query 479 AGGAGTCGGGCGTGGATAAT-AATCGGGTATTAAGTTGTCTACCGAAGC 526 || ||| ||| ||| || | |||| |||| | | ||||||||| Sbjct 2410 AGTCGTCCTGCGCGGAAGATGTAACGGG-GCTAAGCTATATACCGAAGC 2363 >seq2961 Length=224 Score = 116 bits (128), Expect = 1e-23 Identities = 91/109 (83%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 90 TGGAGGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAA 149 |||||| |||||||||| | |||||||| | |||||||| |||||| ||||||||||| Sbjct 219 TGGAGGACCGAACCCACCAGGGTTGAAAACCTGGGGGATGACCTGTGGTTAGGGGTGAAA 160 Query 150 GGCTAAACAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTTAGGT 198 ||| || ||||||| | ||||||||||||| |||||| |||||||| Sbjct 159 GGCCAATCAAACTTCGTGATAGCTGGTTCTCCCCGAAATGCATTTAGGT 111 >seq2960 Length=291 Score = 116 bits (128), Expect = 1e-23 Identities = 98/120 (82%), Gaps = 3/120 (3%) Strand=Plus/Plus Query 2 CGAGTCCGAACAGGGCGAC---AGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCC 58 ||||||||||||||||| | ||||||||||| |||||||||| | |||||||||| || Sbjct 166 CGAGTCCGAACAGGGCGCCCATAGTCGCTGGGTCTAGACCCGAAGCGAAGTGATCTAGCC 225 Query 59 ATGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAA 118 |||| |||| ||||| ||||| || | |||||| |||||||||| | |||||||| Sbjct 226 ATGGGCAGGTTGAAGCGCGGGTAAGACCGCGTGGAGGACCGAACCCACCAGGGTTGAAAA 285 >seq8098 Length=219 Score = 93.3 bits (102), Expect = 1e-16 Identities = 142/200 (71%), Gaps = 3/200 (2%) Strand=Plus/Plus Query 273 CAAACTCCGAATGCGCATCAGTTTTACCGCGGGAGTGAGGGCATGGGTGCTAAGGTCCGT 332 |||||||||||||| | ||| | || || |||||| ||| | |||| ||||| Sbjct 23 CAAACTCCGAATGCCGGTAAGTGAAAGCGTGGCAGTGAGACTGCGGGGGATAAGCTCCGT 82 Query 333 GCCCGAGAGGAGAAGAATCCGGACTATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAA 392 ||||||| || | || ||| | | ||||||||||| || | ||||||| | Sbjct 83 AGTCGAGAGGGAAACAGCCCAGACCACCGGCTAAGGCCCCTAAGCGTGTGCTAAGTGGGA 142 Query 393 CTAACGAAGTCTGATTGCTAAGACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTA 452 || || || |||| ||||| | |||| |||||||| |||||||||| | || | Sbjct 143 --AAGGATGTGGAGTTGCACAGACAACCAGGAGGTTGGCTTAGAAGCAGCCA-CCCTTGA 199 Query 453 AAGAGTGCGTAACAGCTCAC 472 |||||||||||| ||||||| Sbjct 200 AAGAGTGCGTAATAGCTCAC 219 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1689462162432