Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178035.1_202017-04- 25] 8,158 sequences; 13,853,465 total letters Query= AAMG01002223.1 Length=366 Score E Sequences producing significant alignments: (Bits) Value seq5714 178 3e-42 seq3228 145 2e-32 >seq5714 Length=6154 Score = 178 bits (196), Expect = 3e-42 Identities = 212/285 (74%), Gaps = 7/285 (2%) Strand=Plus/Plus Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACG- 59 ||||||||||||| ||||||||| ||||||||| | ||||| || | || || Sbjct 5367 GGCTGCTGGCACGTAGTTAGCCGGTGCTTATTCTTCCGGTACCGTCATCCCCCGACTGTA 5426 Query 60 -TGGA----AGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCT 114 | || ||| ||| || || | ||||| ||||||| ||| || ||||| || Sbjct 5427 TTAGAGCCAAGGATTTCTTTCCGGACAAAAGTGCTTTACAACCCGAAGG-CCTTCTTCAC 5485 Query 115 TCACGCTACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTC 174 ||||| | | ||||| |||| || ||| |||||| |||| ||||| |||||||||||| Sbjct 5486 ACACGCGGCATTGCTGGATCAGGCTTTCGCCCATTGTCCAAAATTCCCCACTGCTGCCTC 5545 Query 175 CCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCT 234 |||||||||| ||| |||||||||||| ||| ||||| | | |||||||||| | || Sbjct 5546 CCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGGTCGTCCTCTCAGACCAGCT 5605 Query 235 ATCCATCGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAAT 279 | ||||| | || ||| |||| ||||||| || |||| ||||| Sbjct 5606 ACTGATCGTCGCCTTGGTAGGCCTTTACCCCACCAACTAGCTAAT 5650 >seq3228 Length=667 Score = 145 bits (160), Expect = 2e-32 Identities = 178/243 (73%), Gaps = 15/243 (6%) Strand=Plus/Plus Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACGT 60 ||||||||||||| ||||||||| |||| ||| |||||| || || | | Sbjct 440 GGCTGCTGGCACGTAGTTAGCCGGCGCTTCTTCTGCAGGTACCGTCA--CTTGCGC---- 493 Query 61 GGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGC 120 || |||||| | ||||| |||||||| ||| || ||||||||| |||||| Sbjct 494 --------TTCTTCCCTGCTGAAAGAGGTTTACAACCCGAAGG-CCTTCATCCCTCACGC 544 Query 121 TACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAG 180 | | |||| |||| || ||| |||||| ||||||||| |||||||||||||||||| Sbjct 545 GGCGTCGCTGCATCAGGCTTTCGCCCATTGTGCAATATTCCCCACTGCTGCCTCCCGTAG 604 Query 181 GAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCAT 240 |||| ||| |||||||||||| ||| ||||| | | |||||||| | ||| || | Sbjct 605 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCCGGTCGCCCTCTCAGGCCGGCTACCCGT 664 Query 241 CGT 243 ||| Sbjct 665 CGT 667 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1068712807296