Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178035.1_202017-04-
25] 8,158 sequences; 13,853,465 total letters
Query= AAMG01002223.1
Length=366
Score E
Sequences producing significant alignments: (Bits) Value
seq5714 178 3e-42
seq3228 145 2e-32
>seq5714
Length=6154
Score = 178 bits (196), Expect = 3e-42
Identities = 212/285 (74%), Gaps = 7/285 (2%)
Strand=Plus/Plus
Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACG- 59
||||||||||||| ||||||||| ||||||||| | ||||| || | || ||
Sbjct 5367 GGCTGCTGGCACGTAGTTAGCCGGTGCTTATTCTTCCGGTACCGTCATCCCCCGACTGTA 5426
Query 60 -TGGA----AGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCT 114
| || ||| ||| || || | ||||| ||||||| ||| || ||||| ||
Sbjct 5427 TTAGAGCCAAGGATTTCTTTCCGGACAAAAGTGCTTTACAACCCGAAGG-CCTTCTTCAC 5485
Query 115 TCACGCTACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTC 174
||||| | | ||||| |||| || ||| |||||| |||| ||||| ||||||||||||
Sbjct 5486 ACACGCGGCATTGCTGGATCAGGCTTTCGCCCATTGTCCAAAATTCCCCACTGCTGCCTC 5545
Query 175 CCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCT 234
|||||||||| ||| |||||||||||| ||| ||||| | | |||||||||| | ||
Sbjct 5546 CCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGGTCGTCCTCTCAGACCAGCT 5605
Query 235 ATCCATCGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAAT 279
| ||||| | || ||| |||| ||||||| || |||| |||||
Sbjct 5606 ACTGATCGTCGCCTTGGTAGGCCTTTACCCCACCAACTAGCTAAT 5650
>seq3228
Length=667
Score = 145 bits (160), Expect = 2e-32
Identities = 178/243 (73%), Gaps = 15/243 (6%)
Strand=Plus/Plus
Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACGT 60
||||||||||||| ||||||||| |||| ||| |||||| || || | |
Sbjct 440 GGCTGCTGGCACGTAGTTAGCCGGCGCTTCTTCTGCAGGTACCGTCA--CTTGCGC---- 493
Query 61 GGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGC 120
|| |||||| | ||||| |||||||| ||| || ||||||||| ||||||
Sbjct 494 --------TTCTTCCCTGCTGAAAGAGGTTTACAACCCGAAGG-CCTTCATCCCTCACGC 544
Query 121 TACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAG 180
| | |||| |||| || ||| |||||| ||||||||| ||||||||||||||||||
Sbjct 545 GGCGTCGCTGCATCAGGCTTTCGCCCATTGTGCAATATTCCCCACTGCTGCCTCCCGTAG 604
Query 181 GAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCAT 240
|||| ||| |||||||||||| ||| ||||| | | |||||||| | ||| || |
Sbjct 605 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCCGGTCGCCCTCTCAGGCCGGCTACCCGT 664
Query 241 CGT 243
|||
Sbjct 665 CGT 667
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1068712807296
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |