Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178045.1_202017-04- 25] 1,441 sequences; 11,513,936 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq766 717 0.0 seq622 141 3e-31 seq960 78.8 3e-12 >seq766 Length=6085 Score = 717 bits (794), Expect = 0.0 Identities = 462/498 (93%), Gaps = 9/498 (2%) Strand=Plus/Minus Query 50 AGGACACCTGCGTTATGGTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAA 109 |||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 6085 AGGACATCTGCGTTATCGTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAA 6026 Query 110 TGTCATCAACCCGGATCGGCCCGCGAA--GGACCTT-AACGCCAGAAAATGGTCGGTGAA 166 |||| |||||||||||| |||| |||| ||||||| || || |||| ||| |||| Sbjct 6025 TGTCTTCAACCCGGATCAGCCC-CGAATGGGACCTTGAATGCTAGAACGTGGAAAATGAA 5967 Query 167 GACCAGTTCCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGC 226 |||| ||||||||||||| |||||||| |||| |||| ||||||||||||||||| || Sbjct 5966 TTCCAGCTCCGCTTCATTGAATAAGTAAAGAAACTATAAAGGTAGTGGTATTTCACTGGC 5907 Query 227 GCCGAAACGGCTCCCACTTATTCTACACCTCTCAA-GTCATTTCACAAAGTCGGACTAGA 285 |||||| |||||||||||||||||||| ||| | ||| ||||||| ||| |||||| Sbjct 5906 GCCGAA---GCTCCCACTTATTCTACACC-CTCTATGTCTCTTCACAATGTCAAACTAGA 5851 Query 286 GTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGT 345 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 5850 GTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGT 5791 Query 346 GGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCA 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5790 GGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCA 5731 Query 406 CTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTA 465 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5730 CTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTA 5671 Query 466 CCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTG 525 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5670 CCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTG 5611 Query 526 CGTCAACATCACTTTCTG 543 |||||||||||||||||| Sbjct 5610 CGTCAACATCACTTTCTG 5593 >seq622 Length=1030 Score = 141 bits (156), Expect = 3e-31 Identities = 86/91 (95%), Gaps = 0/91 (0%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| ||||| |||||||||||||||||||||| ||||||||||||| ||||||||| Sbjct 91 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGCCCCCCTTAGGACATCTGCGTTATC 32 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTC 97 ||||||||||||||||||||||||||||||| Sbjct 31 GTTTAACAGATGTGCCGCCCCAGCCAAACTC 1 >seq960 Length=17799 Score = 78.8 bits (86), Expect = 3e-12 Identities = 48/51 (94%), Gaps = 0/51 (0%) Strand=Plus/Plus Query 50 AGGACACCTGCGTTATGGTTTAACAGATGTGCCGCCCCAGCCAAACTCCCC 100 |||||| ||||||||| ||||||||||||||||||||||||||||||| || Sbjct 1 AGGACATCTGCGTTATCGTTTAACAGATGTGCCGCCCCAGCCAAACTCTCC 51 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635176436768