Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178075.1_202017-04-
25] 6,246 sequences; 12,545,896 total letters
Query= AAMG01000140.1
Length=336
Score E
Sequences producing significant alignments: (Bits) Value
seq1991 197 3e-48
seq5380 104 5e-20
>seq1991
Length=3667
Score = 197 bits (218), Expect = 3e-48
Identities = 241/325 (74%), Gaps = 9/325 (3%)
Strand=Plus/Minus
Query 11 AGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAGTGATTCG 70
||||| |||||||||| |||||| |||| || ||||| | ||||||||| || | |
Sbjct 3159 AGGGGAGTGAAATAGATCCTGAAACCGCATGCATACAAACAGTCGGAGCCTCGTAAGG-G 3101
Query 71 GTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGT-CACCAGCGAGGTTAAG 129
|||||||||| ||||||| |||||| | | ||| ||| ||| || ||| || ||||
Sbjct 3100 GTGACGGCGTACCTTTTGTATAATGGGTCAGCGACTTA--CGTTCAGTAGCAAGCTTAAC 3043
Query 130 GGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGCG 189
| | ||| || || || ||||||||| | || |||||| ||||| |||
Sbjct 3042 CGTATAGGGC-----AGGCGTAGCGAAAGCGAGTCCGAATAGGGCGTTCAGTTGCTGGGC 2988
Query 190 CTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATG 249
||||| ||||||| |||||||| ||| | |||| ||||| |||||||| ||| ||
Sbjct 2987 GTAGACCCGAAACCAGGTGATCTATCCATGGCCAGGATGAAGGTGCGGTAACACGTACTG 2928
Query 250 GAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGG 309
|||| ||||||| |||||||||||||| |||||| | || |||||||||||||
Sbjct 2927 GAGGTCCGAACCCACTAACGTTGAAAAGTTAGGGGATGAGCTGTGGATAGGGGTGAAAGG 2868
Query 310 CCAATCAAACTGGGAAATAGCTCGT 334
| || ||||| |||||||||| ||
Sbjct 2867 CTAAACAAACCTGGAAATAGCTGGT 2843
>seq5380
Length=172
Score = 104 bits (114), Expect = 5e-20
Identities = 125/167 (75%), Gaps = 6/167 (4%)
Strand=Plus/Plus
Query 11 AGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAGT--GATT 68
||||| ||||||||| |||||| ||| | |||||||| | || |||||| | | |
Sbjct 8 AGGGGAGTGAAATAGTACCTGAAACCGTGTGCCTACAATCCGTTGGAGCCTCCTTGGCTG 67
Query 69 CGGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAA 128
|||||| |||||||||||| | ||||||||| ||||||||| ||| ||||||||||
Sbjct 68 GGGTGACAGCGTGCCTTTTGAAGAATGAGCCTGCGAGTTAGTGCTCAGTGGCGAGGTTAA 127
Query 129 GGGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCG 175
| | || | ||||| || ||||||||| | |||||||||
Sbjct 128 -CCCGTGTGG---GGAAGCCGTAGCGAAAGCGAGTCCGAACAGGGCG 170
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 972739238912
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |