Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178075.1_202017-04- 25] 6,246 sequences; 12,545,896 total letters Query= AAMG01000140.1 Length=336 Score E Sequences producing significant alignments: (Bits) Value seq1991 197 3e-48 seq5380 104 5e-20 >seq1991 Length=3667 Score = 197 bits (218), Expect = 3e-48 Identities = 241/325 (74%), Gaps = 9/325 (3%) Strand=Plus/Minus Query 11 AGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAGTGATTCG 70 ||||| |||||||||| |||||| |||| || ||||| | ||||||||| || | | Sbjct 3159 AGGGGAGTGAAATAGATCCTGAAACCGCATGCATACAAACAGTCGGAGCCTCGTAAGG-G 3101 Query 71 GTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGT-CACCAGCGAGGTTAAG 129 |||||||||| ||||||| |||||| | | ||| ||| ||| || ||| || |||| Sbjct 3100 GTGACGGCGTACCTTTTGTATAATGGGTCAGCGACTTA--CGTTCAGTAGCAAGCTTAAC 3043 Query 130 GGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGCG 189 | | ||| || || || ||||||||| | || |||||| ||||| ||| Sbjct 3042 CGTATAGGGC-----AGGCGTAGCGAAAGCGAGTCCGAATAGGGCGTTCAGTTGCTGGGC 2988 Query 190 CTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATG 249 ||||| ||||||| |||||||| ||| | |||| ||||| |||||||| ||| || Sbjct 2987 GTAGACCCGAAACCAGGTGATCTATCCATGGCCAGGATGAAGGTGCGGTAACACGTACTG 2928 Query 250 GAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGG 309 |||| ||||||| |||||||||||||| |||||| | || ||||||||||||| Sbjct 2927 GAGGTCCGAACCCACTAACGTTGAAAAGTTAGGGGATGAGCTGTGGATAGGGGTGAAAGG 2868 Query 310 CCAATCAAACTGGGAAATAGCTCGT 334 | || ||||| |||||||||| || Sbjct 2867 CTAAACAAACCTGGAAATAGCTGGT 2843 >seq5380 Length=172 Score = 104 bits (114), Expect = 5e-20 Identities = 125/167 (75%), Gaps = 6/167 (4%) Strand=Plus/Plus Query 11 AGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAGT--GATT 68 ||||| ||||||||| |||||| ||| | |||||||| | || |||||| | | | Sbjct 8 AGGGGAGTGAAATAGTACCTGAAACCGTGTGCCTACAATCCGTTGGAGCCTCCTTGGCTG 67 Query 69 CGGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAA 128 |||||| |||||||||||| | ||||||||| ||||||||| ||| |||||||||| Sbjct 68 GGGTGACAGCGTGCCTTTTGAAGAATGAGCCTGCGAGTTAGTGCTCAGTGGCGAGGTTAA 127 Query 129 GGGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCG 175 | | || | ||||| || ||||||||| | ||||||||| Sbjct 128 -CCCGTGTGG---GGAAGCCGTAGCGAAAGCGAGTCCGAACAGGGCG 170 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 972739238912