Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178075.1_202017-04- 25] 6,246 sequences; 12,545,896 total letters Query= AAMG01000370.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq1991 125 7e-27 seq4890 87.8 2e-15 >seq1991 Length=3667 Score = 125 bits (138), Expect = 7e-27 Identities = 141/182 (77%), Gaps = 9/182 (5%) Strand=Plus/Minus Query 8 GGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACGGG 67 ||||||||||| ||| || |||||| |||||||| | || ||||||||||||||||| Sbjct 3627 GGTGGATGCCTTGGCGATCACAGGCGATGAAGGACGCGGTAGCCTGCGAAAAGCTACGGG 3568 Query 68 GA-TTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCCGAT-ATATTGGA 125 || ||||| | | | ||||||||||||| ||||||||||| ||||| | | ||||| Sbjct 3567 GAGCTGGCAAACAAGCTTTGATCCGTAGATGTCCGAATGGGGAAACCCACTCCTTTTGGA 3508 Query 126 G-AT--ATATCATAACGC-TAGGC---GTTAGGCGAACGTGGGGAACTGAAACATCTAAG 178 | || || | || | ||||| || | ||||||| || ||||||||||||||||| Sbjct 3507 GTATCCATGGCTGAATACATAGGCCATGTGAAGCGAACGCGGTGAACTGAAACATCTAAG 3448 Query 179 TA 180 || Sbjct 3447 TA 3446 >seq4890 Length=333 Score = 87.8 bits (96), Expect = 2e-15 Identities = 89/115 (77%), Gaps = 1/115 (1%) Strand=Plus/Minus Query 1 GGCAGACGGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAG 60 |||| | ||||||||||| ||| || |||| |||||||||||||| || |||||| ||| Sbjct 239 GGCACAGGGTGGATGCCTTGGCACTAGGAGCCGAAGAAGGACGTGGTAGCCTGCGATAAG 180 Query 61 CTACGGGGA-TTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCC 114 | |||||| ||||| | | ||||||| | | ||||||||||| ||||| Sbjct 179 CCTCGGGGAGCTGGCAAACGAGCTGTGATCCGAGGGTTTCCGAATGGGGGAACCC 125 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476771149726