Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178075.1_202017-04- 25] 6,246 sequences; 12,545,896 total letters Query= AAMG01000538.1 Length=248 Score E Sequences producing significant alignments: (Bits) Value seq1304 141 1e-31 seq1991 116 5e-24 >seq1304 Length=204 Score = 141 bits (156), Expect = 1e-31 Identities = 97/108 (90%), Gaps = 1/108 (1%) Strand=Plus/Plus Query 1 CTTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCAC 60 |||| ||||||| |||||||||||||||||||||||||||||| ||| | | |||||||| Sbjct 58 CTTAACCTTCCAGCACCGGGCAGGCGTCAGTCCGTATACATCGTCTTGC-GACTTCGCAC 116 Query 61 GGACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACC 108 |||||||||||||||||||||||||||||| | || |||||||| || Sbjct 117 GGACCTGTGTTTTTAGTAAACAGTCGCTTCTCCCTGGTCTCTGCGGCC 164 >seq1991 Length=3667 Score = 116 bits (128), Expect = 5e-24 Identities = 177/249 (71%), Gaps = 10/249 (4%) Strand=Plus/Plus Query 7 CTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACCT 66 ||||| |||||||||||||||| || ||||| || |||| | || || ||| | || Sbjct 1814 CTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTC-GTGTTTGCAGAGTGCT 1872 Query 67 GTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCAC--CACCA-----GCTC 119 ||||||||| ||||||||||| || | || ||| ||| | |||| || | Sbjct 1873 GTGTTTTTATTAAACAGTCGCAGCCACCAGTTTATTGCAACCCCTTCACCCTTCTGGCGC 1932 Query 120 AACACGTCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGA 179 || | || | | || ||| |||| |||||||||||||| ||| |||||||| Sbjct 1933 AAGCCA--GTCAAGCTACAAGGGCGTACCTTATCCCGAAGTTACGGTACCAATTTGCCGA 1990 Query 180 ATTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGG 239 |||||| || ||||| | | | |||||||| || ||| | | ||||||||||||| Sbjct 1991 GTTCCTTCTCCCGAGTTCTCTCAAGCGCCTTAGAATACTCATCTCGCCCACCTGTGTCGG 2050 Query 240 TTTACGGTA 248 ||| ||||| Sbjct 2051 TTTGCGGTA 2059 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694357983158