Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178075.1_202017-04- 25] 6,246 sequences; 12,545,896 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq1991 448 1e-123 seq1304 93.3 1e-16 >seq1991 Length=3667 Score = 448 bits (496), Expect = 1e-123 Identities = 352/417 (84%), Gaps = 12/417 (3%) Strand=Plus/Plus Query 1 CGCGGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGC 60 ||||| || | |||||| ||||| | ||||| ||| |||||||||||| |||||||| Sbjct 1624 CGCGGGTAGATTGCATCATCACAAACACTTCAACTTCGCTGAGTCTCGGGAGGAGACAGT 1683 Query 61 GCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 120 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1684 GTGGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 1743 Query 121 TTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTA 180 ||||||||||||| |||||||||||||||||||||| |||| ||||||||||| || Sbjct 1744 TTAGGACCGTTATAGTTACGGCCGCCGTTTACCGGGACTTCAATCAAGAGCTT-GC---- 1798 Query 181 GCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTT 240 ||||||||| |||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 1799 ----ACCCCATCATTTAATCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTT 1854 Query 241 TCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACC 300 ||||||||||||||||||||||||||| |||||||||||||| || || | || | | Sbjct 1855 TCGTGTTTGCAGAGTGCTGTGTTTTTATTAAACAGTCGCAGCCACC-AGTTTATTGCAAC 1913 Query 301 GGCATGA-GCTTACGGAGCAAGTCCTTCACCCT-CACCGGCGCACCTTCTCCCGAAGTTA 358 | | | ||| || ||||| | ||| || || |||| ||||| ||||||||||| Sbjct 1914 CCCTTCACCCTTCTGGCGCAAGCCAGTCAAGCTACAAGGGCGTACCTTATCCCGAAGTTA 1973 Query 359 CGGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTC 415 |||| || |||||| ||||||||| |||||||||||||||||||||| | || ||| Sbjct 1974 CGGTACCAATTTGCCGAGTTCCTTCTCCCGAGTTCTCTCAAGCGCCTTAGAATACTC 2030 >seq1304 Length=204 Score = 93.3 bits (102), Expect = 1e-16 Identities = 119/164 (73%), Gaps = 4/164 (2%) Strand=Plus/Plus Query 142 CCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTA----GCTAACCCCATCAATTA 197 ||||||||||| ||||||| || ||||||| | | | |||| | ||| Sbjct 2 CCGCCGTTTACTGGGGCTTAAATTCTGAGCTTCACCCCGAAGGGTTGACCCGTCCTCTTA 61 Query 198 ACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGCAGAGTGC 257 ||||||| ||||||||||||||||| || ||||| || ||| || || ||| | | Sbjct 62 ACCTTCCAGCACCGGGCAGGCGTCAGTCCGTATACATCGTCTTGCGACTTCGCACGGACC 121 Query 258 TGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACCG 301 |||||||||| ||||||||||| | |||||| ||| || ||| Sbjct 122 TGTGTTTTTAGTAAACAGTCGCTTCTCCCTGGTCTCTGCGGCCG 165 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260721250432