Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178075.1_202017-04- 25] 6,246 sequences; 12,545,896 total letters Query= AAMG01001083.1 Length=339 Score E Sequences producing significant alignments: (Bits) Value seq1991 188 1e-45 seq5432 95.1 2e-17 >seq1991 Length=3667 Score = 188 bits (208), Expect = 1e-45 Identities = 179/229 (78%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 111 GGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGC 170 ||||||||| | ||||||||||||||||||||| |||||||||| |||||||||| Sbjct 1450 GGGACAGTGCATGGTAGGCAGTTTGACTGGGGCGGTCTCCTCCCAAAGCGTAACGGAGGA 1391 Query 171 GCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTG 230 | | ||| ||| || | || ||||| | ||| | ||||||| |||| ||| ||| Sbjct 1390 GTACGAAGGTACGCTAGGTACGGTCGGAAATCGTGCTGATAGTGCAATGGCATAAGCGTG 1331 Query 231 TTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGT 290 || ||||||| ||| |||||| |||||| |||||| || | || |||||||| ||| Sbjct 1330 CTTAACTGCGAGACCGACAAGTCGAGCAGGTGCGAAAGCAGGTCATAGTGATCCGGTGGT 1271 Query 291 GCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 ||| |||||| |||| |||||| ||||||||||| ||| ||||||||| Sbjct 1270 TCTGTATGGAAGGGCCATCGCTCAACGGATAAAAGGTACTCTGGGGATA 1222 >seq5432 Length=179 Score = 95.1 bits (104), Expect = 2e-17 Identities = 76/92 (83%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 248 CAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTGCTGAATGGAACGGCCG 307 || ||| |||||||||||||||||| || ||||||||||||| ||||| |||| Sbjct 7 CAGGTCGAGCAGGGACGAAAGTCGGAACTAGTGATCCGGCGGTGGCTTGTGGAAGCGCCG 66 Query 308 TCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 |||||| ||||||||||| ||||| ||||||| Sbjct 67 TCGCTCAACGGATAAAAGGTACCCCGGGGATA 98 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 982338639296