Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178075.1_202017-04- 25] 6,246 sequences; 12,545,896 total letters Query= AAMG01001178.1 Length=367 Score E Sequences producing significant alignments: (Bits) Value seq2300 363 3e-98 seq3047 156 9e-36 >seq2300 Length=2114 Score = 363 bits (402), Expect = 3e-98 Identities = 286/338 (85%), Gaps = 6/338 (2%) Strand=Plus/Minus Query 1 CTTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCC 60 |||||||| |||||| ||||||| |||||||||||||||| ||||||||||||||||||| Sbjct 823 CTTTACAACCCGAAGGCCTTCTT-CACACACGCGGCATTG-CTGGATCAGGCTTTCGCCC 766 Query 61 ATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAG 120 ||||||||| |||||||||||||||||||||||||||||||| |||||||||||| |||| Sbjct 765 ATTGTCCAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAG 706 Query 121 TGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCA 180 |||| ||| || |||||||||||||| ||| ||||||||||||||| ||| ||||| || Sbjct 705 TGTGGCTGGTCGTCCTCTCAGACCAGCTACTGATCGTCGCCTTGGTAGGCCTTTACCCCA 646 Query 181 CCAACTAGCTAATCCGACCTAGGCTCATCTGATAGCGCAAGGCCCGAAGGTCCCCTGCTT 240 |||||||||||||| | | | ||| | | ||||||| |||||||||||||||| |||| Sbjct 645 CCAACTAGCTAATCAGCCATCGGCCAACCCTATAGCGCGAGGCCCGAAGGTCCCCCGCTT 586 Query 241 TCTCCCGTAGGACGTATGCGGTATTAGCGTCCG--TTTCCGAACGTTATCCCCCACTACC 298 || |||||| |||||||||||||| |||| |||| | ||||||||||||| Sbjct 585 TCATCCGTAGATCGTATGCGGTATTA--ATCCGGCTTTCGCCGGGCTATCCCCCACTACA 528 Query 299 AGGCAGATTCCTAGGCATTACTCACCCGTCCGCCGCTC 336 | || |||| | | ||||||||||||| |||| ||| Sbjct 527 GGACATGTTCCGATGTATTACTCACCCGTTCGCCACTC 490 >seq3047 Length=229 Score = 156 bits (172), Expect = 9e-36 Identities = 110/123 (89%), Gaps = 2/123 (2%) Strand=Plus/Minus Query 2 TTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCA 61 ||||||| |||||| ||||| | | | |||||||| | | ||| |||||||||||||||| Sbjct 121 TTTACAACCCGAAGGCCTTCATCC-CTCACGCGGCGTCG-CTGCATCAGGCTTTCGCCCA 64 Query 62 TTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGT 121 |||| |||||||||||||||||||||||||||||||||||| |||||||||||| ||||| Sbjct 63 TTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGT 4 Query 122 GTG 124 ||| Sbjct 3 GTG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1071933042880