Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178075.1_202017-04-
25] 6,246 sequences; 12,545,896 total letters
Query= AAMG01001213.1
Length=600
Score E
Sequences producing significant alignments: (Bits) Value
seq1991 356 8e-96
seq5380 196 2e-47
>seq1991
Length=3667
Score = 356 bits (394), Expect = 8e-96
Identities = 418/554 (75%), Gaps = 26/554 (5%)
Strand=Plus/Plus
Query 52 CGGCATTCGGAGTTTGGTTGATTTCGG--TAAGCTTG--TGGGCCCCCTAGACCATC-CA 106
||| |||||||||||| | || ||| ||| || | | ||||| | ||||| ||
Sbjct 2730 CGGTATTCGGAGTTTGCT--ATGGCGGGGTAATCTGCAATAGACCCCCCA-ACCATGACA 2786
Query 107 GTGCTCTACCTCCGG-GAAGAAACACGCGACGCTGCACCTAAATGCATTTCGGGGAGAAC 165
|||||||||| ||| | || ||||| | | || |||||||| |||||| ||||||
Sbjct 2787 GTGCTCTACCCCCGAAGGTGAGACACGAGGCACT--ACCTAAATAGTTTTCGGAGAGAAC 2844
Query 166 CAGCTATCACGAAGTTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTTTT 225
||||||| | | ||||| || ||||||||||||||||||||| ||||||||| | ||||
Sbjct 2845 CAGCTATTTCCAGGTTTGTTTAGCCTTTCACCCCTATCCACAGCTCATCCCCTAACTTTT 2904
Query 226 CAACCTAAGTGGGTTCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGAT 285
|||| | ||||||||||| |||||| || ||||| ||||| |||| ||||||||
Sbjct 2905 CAACGTTAGTGGGTTCGGACCTCCAGTACGTGTTACCGCACCTTCATCCTGGCCATGGAT 2964
Query 286 AGATCACTTCGCTTCGGGTCTTGATCGTGCCACTCATACGCCCTATTCGGACTCGCTTTC 345
||||||| | | ||||||||| | || ||| | |||||||||||||||||||||||
Sbjct 2965 AGATCACCTGGTTTCGGGTCTACGCCCAGCAACTGA-ACGCCCTATTCGGACTCGCTTTC 3023
Query 346 GCTACGGCTACCCCACACGGGTTAACCTCGCGACACAACGCAAACTCGCAGGCTCATTCT 405
|||||| || ||| | || |||||| || || || |||| || |||| | | |||| |
Sbjct 3024 GCTACGCCTGCCCTATAC-GGTTAAGCTTGCTACTGAACG-TAAGTCGCTGACCCATTAT 3081
Query 406 TCAAAAGGCACGCCGTCACCTGGTACCTAAAAGGCACTTCAGCTCCGACGGATTGTAGGC 465
||||||| ||||||||||| | || || |||||||| | ||||| ||
Sbjct 3082 ACAAAAGGTACGCCGTCACC----CCTTACGAG--------GCTCCGACTGTTTGTATGC 3129
Query 466 ACATGGTTTCAGGTACTATTTCACTCCCCGCCAGGGGTACTTTTCACCTTTCCCTCACGG 525
| ||||||||| |||||||||||||| || ||||| |||||| ||||||||||||||
Sbjct 3130 ATGCGGTTTCAGGATCTATTTCACTCCCCTCCCGGGGTTCTTTTCGCCTTTCCCTCACGG 3189
Query 526 TACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATT 585
|||| || | ||||||||| | |||||||||| ||| || ||||||| ||| ||
Sbjct 3190 TACTGGTTCACTATCGGTCGATCACGAGTATTTAGCCTTGGAGGATGGTCCCCCCATCTT 3249
Query 586 CACACGAAATTTCA 599
|| || ||||||
Sbjct 3250 CAGACAGGATTTCA 3263
>seq5380
Length=172
Score = 196 bits (216), Expect = 2e-47
Identities = 151/179 (84%), Gaps = 9/179 (5%)
Strand=Plus/Minus
Query 324 CGCCCTATTCGGACTCGCTTTCGCTACGGCTACCCCACACGGGTTAACCTCGCGACACAA 383
|||||| |||||||||||||||||||||||| ||||||||||||||||||||| || |
Sbjct 170 CGCCCTGTTCGGACTCGCTTTCGCTACGGCTTCCCCACACGGGTTAACCTCGCCACTGAG 111
Query 384 CGCAAACTCGCAGGCTCATTCTTCAAAAGGCACGCCGTCACCTGGTACCTAAAAGGCACT 443
| | ||||||||||||||||||||||||||||||| |||||| || || ||
Sbjct 110 CACTAACTCGCAGGCTCATTCTTCAAAAGGCACGCTGTCACC-----CC----AGCCAAG 60
Query 444 TCAGCTCCGACGGATTGTAGGCACATGGTTTCAGGTACTATTTCACTCCCCGCCAGGGG 502
||||| |||||||||||||||| ||||||||||||||||||||||||| || ||||
Sbjct 59 GAGGCTCCAACGGATTGTAGGCACACGGTTTCAGGTACTATTTCACTCCCCTCCCGGGG 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1817486472704
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |