Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178075.1_202017-04- 25] 6,246 sequences; 12,545,896 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq1991 430 3e-118 seq5380 120 8e-25 >seq1991 Length=3667 Score = 430 bits (476), Expect = 3e-118 Identities = 353/415 (85%), Gaps = 12/415 (3%) Strand=Plus/Plus Query 4 CCGATCCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAG 63 || |||||||| |||| || ||||||||| ||||| |||| ||||||| |||||||| | Sbjct 2877 CCTATCCACAGCTCATCCC-CTAACTTTT-CAACGTTAGTGGGTTCGGACCTCCAGTACG 2934 Query 64 TAGTTACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTC 123 | |||||| ||||| || |||| |||| ||||||||| || ||||| |||||||| | Sbjct 2935 T-GTTACCGCACCTT-CATCCTGGCCAT-GGATAGATCACCTGGTTT-CGGGTCTACG-C 2989 Query 124 CCAGCGACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTATTCGGTTAAG 183 ||||| ||| |||||||| | |||||||||| |||||||||| |||||| |||||||| Sbjct 2990 CCAGCAACTGAACGCCCTATTCGGACTCGCTTT-CGCTACGCCTGCCCTATACGGTTAAG 3048 Query 184 CTTTGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAA 243 ||| || |||||| |||||||||||||||||||||||||||||||| ||||||| | Sbjct 3049 CTT-GCTACTGAACGTAAGTCGCTGACCCATTATACAAAAGGTACGCCGTCACCC--CTT 3105 Query 244 AGTGGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGG 303 | |||||| |||| ||||| |||| |||||||||||||||||||||||||||| |||| Sbjct 3106 ACGAGGCTCCGACTGTTTGTATGCATGCGGTTTCAGGATCTATTTCACTCCCCTC-CCGG 3164 Query 304 GGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAG 363 ||||||||||||||||||||||||||||| |||||||||||||| ||| ||||||||| Sbjct 3165 GGTTCTTTTCGCCTTTCCCTCACGGTACTGGTTCACTATCGGTCGATCACGAGTATTTAG 3224 Query 364 CCTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACT 418 |||||||||||||||||||||| |||||||| |||| |||| ||| |||||| Sbjct 3225 CCTTGGAGGATGGTCCCCCCATCTTCAGACAGGATTTCACGTGTCCCGCCCTACT 3279 >seq5380 Length=172 Score = 120 bits (132), Expect = 8e-25 Identities = 133/172 (77%), Gaps = 4/172 (2%) Strand=Plus/Minus Query 136 CGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTATTCGGTTAAGCTTTGCCACTGA 195 |||||| | |||||||||| ||||||| || ||| | ||| | | | | |||||||| Sbjct 170 CGCCCTGTTCGGACTCGCTTT-CGCTACGGCTTCCCCACACGGGTTAACCTCGCCACTGA 112 Query 196 AAA-TAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAA-CAAAGTGGGCTCC 253 | ||| |||| | | |||| | ||||||| |||| ||||||| | | ||| |||||| Sbjct 111 GCACTAACTCGCAGGCTCATTCTTCAAAAGGCACGCTGTCACCCCAGCCAAGGAGGCTCC 52 Query 254 CACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGG 305 || | ||||| ||| ||||||||||| |||||||||||||||| |||||| Sbjct 51 AACGGATTGTAGGCACACGGTTTCAGGTACTATTTCACTCCCCTC-CCGGGG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1241522449664