Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178075.1_202017-04-
25] 6,246 sequences; 12,545,896 total letters
Query= AAMG01001291.1
Length=420
Score E
Sequences producing significant alignments: (Bits) Value
seq1991 430 3e-118
seq5380 120 8e-25
>seq1991
Length=3667
Score = 430 bits (476), Expect = 3e-118
Identities = 353/415 (85%), Gaps = 12/415 (3%)
Strand=Plus/Plus
Query 4 CCGATCCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAG 63
|| |||||||| |||| || ||||||||| ||||| |||| ||||||| |||||||| |
Sbjct 2877 CCTATCCACAGCTCATCCC-CTAACTTTT-CAACGTTAGTGGGTTCGGACCTCCAGTACG 2934
Query 64 TAGTTACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTC 123
| |||||| ||||| || |||| |||| ||||||||| || ||||| |||||||| |
Sbjct 2935 T-GTTACCGCACCTT-CATCCTGGCCAT-GGATAGATCACCTGGTTT-CGGGTCTACG-C 2989
Query 124 CCAGCGACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTATTCGGTTAAG 183
||||| ||| |||||||| | |||||||||| |||||||||| |||||| ||||||||
Sbjct 2990 CCAGCAACTGAACGCCCTATTCGGACTCGCTTT-CGCTACGCCTGCCCTATACGGTTAAG 3048
Query 184 CTTTGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAA 243
||| || |||||| |||||||||||||||||||||||||||||||| ||||||| |
Sbjct 3049 CTT-GCTACTGAACGTAAGTCGCTGACCCATTATACAAAAGGTACGCCGTCACCC--CTT 3105
Query 244 AGTGGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGG 303
| |||||| |||| ||||| |||| |||||||||||||||||||||||||||| ||||
Sbjct 3106 ACGAGGCTCCGACTGTTTGTATGCATGCGGTTTCAGGATCTATTTCACTCCCCTC-CCGG 3164
Query 304 GGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAG 363
||||||||||||||||||||||||||||| |||||||||||||| ||| |||||||||
Sbjct 3165 GGTTCTTTTCGCCTTTCCCTCACGGTACTGGTTCACTATCGGTCGATCACGAGTATTTAG 3224
Query 364 CCTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACT 418
|||||||||||||||||||||| |||||||| |||| |||| ||| ||||||
Sbjct 3225 CCTTGGAGGATGGTCCCCCCATCTTCAGACAGGATTTCACGTGTCCCGCCCTACT 3279
>seq5380
Length=172
Score = 120 bits (132), Expect = 8e-25
Identities = 133/172 (77%), Gaps = 4/172 (2%)
Strand=Plus/Minus
Query 136 CGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTATTCGGTTAAGCTTTGCCACTGA 195
|||||| | |||||||||| ||||||| || ||| | ||| | | | | ||||||||
Sbjct 170 CGCCCTGTTCGGACTCGCTTT-CGCTACGGCTTCCCCACACGGGTTAACCTCGCCACTGA 112
Query 196 AAA-TAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAA-CAAAGTGGGCTCC 253
| ||| |||| | | |||| | ||||||| |||| ||||||| | | ||| ||||||
Sbjct 111 GCACTAACTCGCAGGCTCATTCTTCAAAAGGCACGCTGTCACCCCAGCCAAGGAGGCTCC 52
Query 254 CACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGG 305
|| | ||||| ||| ||||||||||| |||||||||||||||| ||||||
Sbjct 51 AACGGATTGTAGGCACACGGTTTCAGGTACTATTTCACTCCCCTC-CCGGGG 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1241522449664
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |