Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178075.1_202017-04-
25] 6,246 sequences; 12,545,896 total letters
Query= AAMG01001752.1
Length=400
Score E
Sequences producing significant alignments: (Bits) Value
seq2207 271 2e-70
seq4744 208 2e-51
seq1991 163 7e-38
>seq2207
Length=224
Score = 271 bits (300), Expect = 2e-70
Identities = 180/197 (91%), Gaps = 2/197 (1%)
Strand=Plus/Plus
Query 205 TGCCACAGCTTCGGCGGATAACTTAAGCCCCGCTACATTATCGGCGCGGAATCACTTGAC 264
|||||| |||||||||| |||| |||||||||||||| ||||||||||||||||||||
Sbjct 5 TGCCACGGCTTCGGCGGTGTACTTGAGCCCCGCTACATTGTCGGCGCGGAATCACTTGAC 64
Query 265 CAGTGAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTC 324
|||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||
Sbjct 65 CAGTGAGCTATTACGCACTCTTTCAAGGGTGGCTGCTTCTAAGCCAACCTCCTGGTTGTC 124
Query 325 TACGCAACTCCACATCCTTTCCCACTGAGTCAC-CACTTAGGGGCCTTAGCTGATGATCT 383
| ||||||||||||||||||||||| || ||| | ||||||||||||||| | || |||
Sbjct 125 TGTGCAACTCCACATCCTTTCCCACTTAG-CACACGCTTAGGGGCCTTAGCCGGTGGTCT 183
Query 384 GGGCTGTTTCCCTCTCG 400
|||||||||||||||||
Sbjct 184 GGGCTGTTTCCCTCTCG 200
>seq4744
Length=224
Score = 208 bits (230), Expect = 2e-51
Identities = 162/193 (84%), Gaps = 0/193 (0%)
Strand=Plus/Minus
Query 1 CGACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACC 60
|||||||||||||||||||||||||||| ||||||| ||||||||| || ||| || ||
Sbjct 216 CGACTACGCCTGTCGGCCTCGCCTTAGGTCCCGACTTACCCAGGGCGGATTAACCTGGCC 157
Query 61 CTGGAACCCTTGGATAATCGGCGGACGGGATTCCCACCCGTCACACGCTACTCATGCCTG 120
||||||||||||| | |||||||||||| ||| |||||||| |||||||||||||||
Sbjct 156 CTGGAACCCTTGGTCATTCGGCGGACGGGTTTCTCACCCGTCTTTCGCTACTCATGCCTG 97
Query 121 CATTCTCACTCGCATCAACTCCACCACACAGTCACCCGGCAGCTTCACCACTGACACGAC 180
|||||||||||| | ||||||| | || ||| || |||||||| | |||||||
Sbjct 96 CATTCTCACTCGTGTGGGCTCCACCGCTGGGTTCCCCCGCGGCTTCACCGCCCACACGAC 37
Query 181 GCTCCCCTACCCA 193
|||||||||||||
Sbjct 36 GCTCCCCTACCCA 24
>seq1991
Length=3667
Score = 163 bits (180), Expect = 7e-38
Identities = 284/406 (70%), Gaps = 19/406 (5%)
Strand=Plus/Plus
Query 4 CTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACCCTG 63
|||||| | || ||||||||||||| ||||||||||| || || ||| | | |
Sbjct 2283 CTACGCATTTCTGCCTCGCCTTAGGGGCCGACTCACCCTACGCCGATGAACGTTGCGTAG 2342
Query 64 GAACCCTTGGATAATCGGCGGACGGGA--TTCCCACCCGTCACACGCTACTCATGCCTGC 121
||| |||||| ||||| ||| ||| | ||| | | ||||||||||| | ||
Sbjct 2343 GAAACCTTGGGCTTACGGCGAGGGGGCCTTTCACCCCCTTTAT-CGCTACTCATGTCAGC 2401
Query 122 ATTCTCACTCGCATCAACTCCACCACACAGTCACCCGGCAGCTTCACCA-CTGACACGAC 180
|||| |||| | | ||||| ||| | | || ||| |||| | || || ||
Sbjct 2402 ATTCGCACTTCCGATACCTCCAGCACCCTTT-ACAAAGCACCTTCGCAGGCTTACGGAAC 2460
Query 181 GCTCCCCTACCC--------AACCACACAGGTTGCCACAGCTTCGGCGGATAACTTAAGC 232
|||| |||||| || ||| || || ||||||||| ||| |||| ||
Sbjct 2461 GCTCTCCTACCATGCGTGCTAAGCACGCAT----CCGCAGCTTCGGTATATAGCTTA-GC 2515
Query 233 CCCGCTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCAAGG 292
|||| ||||| || |||| | | ||| || |||||||||||||||| ||||| ||||
Sbjct 2516 CCCGTTACATCTTCCGCGCAGGACGACTCGATCAGTGAGCTATTACGCTTTCTTTAAAGG 2575
Query 293 ATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCACTGA 352
|||||||||| |||||||||||||| ||| | || |||| || ||||||||| |
Sbjct 2576 GTGGCTGCTTCTAAGCCAACCTCCTGACTGTTTTAGCCTTCCCACTTCGTTTCCCACTTA 2635
Query 353 GTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCT 398
| | | || ||| ||||||||| | |||||| |||||||||||
Sbjct 2636 G-CTATATTTGGGGACCTTAGCTGGCGGTCTGGGTTGTTTCCCTCT 2680
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1177526447104
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |