Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178075.1_202017-04- 25] 6,246 sequences; 12,545,896 total letters Query= AAMG01001752.1 Length=400 Score E Sequences producing significant alignments: (Bits) Value seq2207 271 2e-70 seq4744 208 2e-51 seq1991 163 7e-38 >seq2207 Length=224 Score = 271 bits (300), Expect = 2e-70 Identities = 180/197 (91%), Gaps = 2/197 (1%) Strand=Plus/Plus Query 205 TGCCACAGCTTCGGCGGATAACTTAAGCCCCGCTACATTATCGGCGCGGAATCACTTGAC 264 |||||| |||||||||| |||| |||||||||||||| |||||||||||||||||||| Sbjct 5 TGCCACGGCTTCGGCGGTGTACTTGAGCCCCGCTACATTGTCGGCGCGGAATCACTTGAC 64 Query 265 CAGTGAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTC 324 |||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| Sbjct 65 CAGTGAGCTATTACGCACTCTTTCAAGGGTGGCTGCTTCTAAGCCAACCTCCTGGTTGTC 124 Query 325 TACGCAACTCCACATCCTTTCCCACTGAGTCAC-CACTTAGGGGCCTTAGCTGATGATCT 383 | ||||||||||||||||||||||| || ||| | ||||||||||||||| | || ||| Sbjct 125 TGTGCAACTCCACATCCTTTCCCACTTAG-CACACGCTTAGGGGCCTTAGCCGGTGGTCT 183 Query 384 GGGCTGTTTCCCTCTCG 400 ||||||||||||||||| Sbjct 184 GGGCTGTTTCCCTCTCG 200 >seq4744 Length=224 Score = 208 bits (230), Expect = 2e-51 Identities = 162/193 (84%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 1 CGACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACC 60 |||||||||||||||||||||||||||| ||||||| ||||||||| || ||| || || Sbjct 216 CGACTACGCCTGTCGGCCTCGCCTTAGGTCCCGACTTACCCAGGGCGGATTAACCTGGCC 157 Query 61 CTGGAACCCTTGGATAATCGGCGGACGGGATTCCCACCCGTCACACGCTACTCATGCCTG 120 ||||||||||||| | |||||||||||| ||| |||||||| ||||||||||||||| Sbjct 156 CTGGAACCCTTGGTCATTCGGCGGACGGGTTTCTCACCCGTCTTTCGCTACTCATGCCTG 97 Query 121 CATTCTCACTCGCATCAACTCCACCACACAGTCACCCGGCAGCTTCACCACTGACACGAC 180 |||||||||||| | ||||||| | || ||| || |||||||| | ||||||| Sbjct 96 CATTCTCACTCGTGTGGGCTCCACCGCTGGGTTCCCCCGCGGCTTCACCGCCCACACGAC 37 Query 181 GCTCCCCTACCCA 193 ||||||||||||| Sbjct 36 GCTCCCCTACCCA 24 >seq1991 Length=3667 Score = 163 bits (180), Expect = 7e-38 Identities = 284/406 (70%), Gaps = 19/406 (5%) Strand=Plus/Plus Query 4 CTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACCCTG 63 |||||| | || ||||||||||||| ||||||||||| || || ||| | | | Sbjct 2283 CTACGCATTTCTGCCTCGCCTTAGGGGCCGACTCACCCTACGCCGATGAACGTTGCGTAG 2342 Query 64 GAACCCTTGGATAATCGGCGGACGGGA--TTCCCACCCGTCACACGCTACTCATGCCTGC 121 ||| |||||| ||||| ||| ||| | ||| | | ||||||||||| | || Sbjct 2343 GAAACCTTGGGCTTACGGCGAGGGGGCCTTTCACCCCCTTTAT-CGCTACTCATGTCAGC 2401 Query 122 ATTCTCACTCGCATCAACTCCACCACACAGTCACCCGGCAGCTTCACCA-CTGACACGAC 180 |||| |||| | | ||||| ||| | | || ||| |||| | || || || Sbjct 2402 ATTCGCACTTCCGATACCTCCAGCACCCTTT-ACAAAGCACCTTCGCAGGCTTACGGAAC 2460 Query 181 GCTCCCCTACCC--------AACCACACAGGTTGCCACAGCTTCGGCGGATAACTTAAGC 232 |||| |||||| || ||| || || ||||||||| ||| |||| || Sbjct 2461 GCTCTCCTACCATGCGTGCTAAGCACGCAT----CCGCAGCTTCGGTATATAGCTTA-GC 2515 Query 233 CCCGCTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCAAGG 292 |||| ||||| || |||| | | ||| || |||||||||||||||| ||||| |||| Sbjct 2516 CCCGTTACATCTTCCGCGCAGGACGACTCGATCAGTGAGCTATTACGCTTTCTTTAAAGG 2575 Query 293 ATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCACTGA 352 |||||||||| |||||||||||||| ||| | || |||| || ||||||||| | Sbjct 2576 GTGGCTGCTTCTAAGCCAACCTCCTGACTGTTTTAGCCTTCCCACTTCGTTTCCCACTTA 2635 Query 353 GTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCT 398 | | | || ||| ||||||||| | |||||| ||||||||||| Sbjct 2636 G-CTATATTTGGGGACCTTAGCTGGCGGTCTGGGTTGTTTCCCTCT 2680 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1177526447104