Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178075.1_202017-04- 25] 6,246 sequences; 12,545,896 total letters Query= AAMG01001844.1 Length=290 Score E Sequences producing significant alignments: (Bits) Value seq2300 190 3e-46 seq3047 93.3 7e-17 >seq2300 Length=2114 Score = 190 bits (210), Expect = 3e-46 Identities = 216/290 (74%), Gaps = 0/290 (0%) Strand=Plus/Minus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60 |||||||||||| || | ||||||||| | |||| | |||||||||| ||| | Sbjct 1165 CCCACGCTTTCGTGCATGAGCGTCAGTATTGGCCCAGGGGGCTGCCTTCGCCATCGGTAT 1106 Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120 |||||| || |||||||||||||| ||||||| ||||||| ||||| | || Sbjct 1105 TCCTCCACATCTCTACGCATTTCACTGCTACACGTGGAATTCTACCCCCCTCTGCCATAC 1046 Query 121 TCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACT 180 || || |||| | ||||||| |||||||||| | ||||||||| | || Sbjct 1045 TCTAGCCTGCCAGTCACCAATGCAGTTCCCAGGTTGAGCCCGGGGATTTCACATCGGTCT 986 Query 181 TGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACG 240 | | |||||| | | | |||||| |||| ||| |||| ||||||| || |||||| Sbjct 985 TAGCAAACCGCCTGCGCACGCTTTACGCCCAGTAATTCCGATTAACGCTCGCACCCTACG 926 Query 241 TATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290 |||||||||||||||||||||||||||||||| |||||||| || |||| Sbjct 925 TATTACCGCGGCTGCTGGCACGTAGTTAGCCGGTGCTTATTCTTCCGGTA 876 >seq3047 Length=229 Score = 93.3 bits (102), Expect = 7e-17 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 217 TCCGGATAACGCTTGCCACCTACGTATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGC 276 |||||| ||||||| | |||||||||||||||||||||||||||||||||||||| || Sbjct 228 TCCGGACAACGCTTACGCCCTACGTATTACCGCGGCTGCTGGCACGTAGTTAGCCGGCGC 169 Query 277 TTATTCCTCAGGTA 290 || ||| |||||| Sbjct 168 TTCTTCTGCAGGTA 155 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 828749850866