Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178075.1_202017-04- 25] 6,246 sequences; 12,545,896 total letters Query= AAMG01001962.1 Length=275 Score E Sequences producing significant alignments: (Bits) Value seq1991 271 1e-70 seq4716 260 2e-67 >seq1991 Length=3667 Score = 271 bits (300), Expect = 1e-70 Identities = 224/273 (82%), Gaps = 0/273 (0%) Strand=Plus/Plus Query 3 AGGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGC 62 ||| | | ||| |||||||||| |||||| ||||| ||||| ||| ||||| ||| || Sbjct 899 AGGCGAGTTTCCCGCTTAGATGCTTTCAGCGGTTATCTCTTCCGAACATAGCTACCCGGC 958 Query 63 TATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACT 122 |||| |||| ||||| ||| ||||||||||| ||||| |||||||||||||||| Sbjct 959 GATGCCACTGGCGTGACAACCGGTACACCAGAGGTTCGTCCACTCCGGTCCTCTCGTACT 1018 Query 123 AAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCG 182 | | |||| || |||||| ||| ||||||||| | |||||||||| ||||||||| || Sbjct 1019 AGGAGCAGCCCCCTTCAAATATCCAACGCCCACGGCAGATAGGGACCAAACTGTCTCACG 1078 Query 183 ACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCT 242 ||||| | |||||||||| ||| ||||||||| ||||||||||| |||||||||||| Sbjct 1079 ACGTTTTAAACCCAGCTCACGTACCTCTTTAAATGGCGAACAGCCATACCCTTGGGACCG 1138 Query 243 ACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 || |||||||||||||||| |||||||||||| Sbjct 1139 GCTACAGCCCCAGGATGAGATGAGCCGACATCG 1171 >seq4716 Length=207 Score = 260 bits (288), Expect = 2e-67 Identities = 182/207 (88%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 58 CCAGCTATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTC 117 ||||| ||| | |||| | |||||||| ||||||||||| |||| ||||||||||||| Sbjct 207 CCAGCGGTGCTCCTGGCGGAACAACTGGCACACCAGAGGTTCGTCCGTCCCGGTCCTCTC 148 Query 118 GTACTAAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTC 177 |||||| ||||||| | |||||| |||||| ||| | | |||||||||||||||||||| Sbjct 147 GTACTAGGGACAGCCCTTCTCAAGTTTCCTGCGCGCGCAGCGGATAGGGACCGAACTGTC 88 Query 178 TCGCGACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGG 237 || ||||||||| |||||||||||||| || ||||||||||||||||||||||||||||| Sbjct 87 TCACGACGTTCTAAACCCAGCTCGCGTACCGCTTTAATGGGCGAACAGCCCAACCCTTGG 28 Query 238 GACCTACTTCAGCCCCAGGATGAGACG 264 |||||||| ||||||||||||| |||| Sbjct 27 GACCTACTCCAGCCCCAGGATGCGACG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 780752755256