Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178075.1_202017-04- 25] 6,246 sequences; 12,545,896 total letters Query= AAMG01002180.1 Length=500 Score E Sequences producing significant alignments: (Bits) Value seq2300 338 2e-90 seq3047 282 1e-73 >seq2300 Length=2114 Score = 338 bits (374), Expect = 2e-90 Identities = 289/359 (81%), Gaps = 26/359 (7%) Strand=Plus/Plus Query 165 CTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACCTGAG 224 ||||||||||||||||| ||||| ||| |||||||||||||||||||||| | ||||| Sbjct 630 CTGATTAGCTAGTTGGTGGGGTAAAGGCCTACCAAGGCGACGATCAGTAGCTGGTCTGAG 689 Query 225 AGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGTG 284 ||| || | |||||| ||| |||||||||||| ||| |||||||||||||||||||||| Sbjct 690 AGGACGACCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAGCAGTG 749 Query 285 GGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAAGGCC 344 |||||| ||| ||||||||| |||||||||| |||||| |||||||| | || ||||||| Sbjct 750 GGGAATTTTGGACAATGGGCGAAAGCCTGATCCAGCAATGCCGCGTGTGTGAAGAAGGCC 809 Query 345 TTCGGGTCGTAAAGC---TCTGTCCTCAAGGAA------------GATA----------A 379 ||||||| ||||||| | ||||| || ||| ||| | Sbjct 810 TTCGGGTTGTAAAGCACTTTTGTCCGGAAAGAAATCCTTGGCTCTAATACAGTCGGGGGA 869 Query 380 TGACGGTACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTA 439 ||||||||| || || |||| ||||||||||||||||||||||||||||||||||||| Sbjct 870 TGACGGTACCGGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTA 929 Query 440 GGGGGCTAGCGTTATCCGGAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAG 498 ||| || ||||||| |||||||||| |||||||||| ||||| ||| ||||| |||| Sbjct 930 GGGTGCGAGCGTTAATCGGAATTACT-GGGCGTAAAGCGTGCGCAGGCGGTTTGCTAAG 987 >seq3047 Length=229 Score = 282 bits (312), Expect = 1e-73 Identities = 200/229 (87%), Gaps = 5/229 (2%) Strand=Plus/Plus Query 237 CACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGTGGGGAATATTGCA 296 |||| ||| |||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct 1 CACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAGCAGTGGGGAATATTGCA 60 Query 297 CAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAAGGCCTTCGGGTCGTAA 356 |||||||| ||||||||||||||| |||||||||||| ||||||||||||||||| |||| Sbjct 61 CAATGGGCGAAAGCCTGATGCAGCGACGCCGCGTGAGGGATGAAGGCCTTCGGGTTGTAA 120 Query 357 AGCTCTGTCCTCAAGGAAGA-----TAATGACGGTACTTGAGGAGGAAGCCCCGGCTAAC 411 | |||| || || |||||| | ||||||||| || || ||||| ||||||||| Sbjct 121 ACCTCTTTCAGCAGGGAAGAAGCGCAAGTGACGGTACCTGCAGAAGAAGCGCCGGCTAAC 180 Query 412 TACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAA 460 ||||||||||||||||||||||||||||||| | |||||| ||||||| Sbjct 181 TACGTGCCAGCAGCCGCGGTAATACGTAGGGCGTAAGCGTTGTCCGGAA 229 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1497506459904