Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178075.1_202017-04-
25] 6,246 sequences; 12,545,896 total letters
Query= AAMG01002180.1
Length=500
Score E
Sequences producing significant alignments: (Bits) Value
seq2300 338 2e-90
seq3047 282 1e-73
>seq2300
Length=2114
Score = 338 bits (374), Expect = 2e-90
Identities = 289/359 (81%), Gaps = 26/359 (7%)
Strand=Plus/Plus
Query 165 CTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACCTGAG 224
||||||||||||||||| ||||| ||| |||||||||||||||||||||| | |||||
Sbjct 630 CTGATTAGCTAGTTGGTGGGGTAAAGGCCTACCAAGGCGACGATCAGTAGCTGGTCTGAG 689
Query 225 AGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGTG 284
||| || | |||||| ||| |||||||||||| ||| ||||||||||||||||||||||
Sbjct 690 AGGACGACCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAGCAGTG 749
Query 285 GGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAAGGCC 344
|||||| ||| ||||||||| |||||||||| |||||| |||||||| | || |||||||
Sbjct 750 GGGAATTTTGGACAATGGGCGAAAGCCTGATCCAGCAATGCCGCGTGTGTGAAGAAGGCC 809
Query 345 TTCGGGTCGTAAAGC---TCTGTCCTCAAGGAA------------GATA----------A 379
||||||| ||||||| | ||||| || ||| ||| |
Sbjct 810 TTCGGGTTGTAAAGCACTTTTGTCCGGAAAGAAATCCTTGGCTCTAATACAGTCGGGGGA 869
Query 380 TGACGGTACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTA 439
||||||||| || || |||| |||||||||||||||||||||||||||||||||||||
Sbjct 870 TGACGGTACCGGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTA 929
Query 440 GGGGGCTAGCGTTATCCGGAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAG 498
||| || ||||||| |||||||||| |||||||||| ||||| ||| ||||| ||||
Sbjct 930 GGGTGCGAGCGTTAATCGGAATTACT-GGGCGTAAAGCGTGCGCAGGCGGTTTGCTAAG 987
>seq3047
Length=229
Score = 282 bits (312), Expect = 1e-73
Identities = 200/229 (87%), Gaps = 5/229 (2%)
Strand=Plus/Plus
Query 237 CACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGTGGGGAATATTGCA 296
|||| ||| |||||||||||| ||| ||||||||||||||||||||||||||||||||||
Sbjct 1 CACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAGCAGTGGGGAATATTGCA 60
Query 297 CAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAAGGCCTTCGGGTCGTAA 356
|||||||| ||||||||||||||| |||||||||||| ||||||||||||||||| ||||
Sbjct 61 CAATGGGCGAAAGCCTGATGCAGCGACGCCGCGTGAGGGATGAAGGCCTTCGGGTTGTAA 120
Query 357 AGCTCTGTCCTCAAGGAAGA-----TAATGACGGTACTTGAGGAGGAAGCCCCGGCTAAC 411
| |||| || || |||||| | ||||||||| || || ||||| |||||||||
Sbjct 121 ACCTCTTTCAGCAGGGAAGAAGCGCAAGTGACGGTACCTGCAGAAGAAGCGCCGGCTAAC 180
Query 412 TACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAA 460
||||||||||||||||||||||||||||||| | |||||| |||||||
Sbjct 181 TACGTGCCAGCAGCCGCGGTAATACGTAGGGCGTAAGCGTTGTCCGGAA 229
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1497506459904
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |