Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178075.1_202017-04- 25] 6,246 sequences; 12,545,896 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq2300 324 3e-86 seq3047 95.1 3e-17 >seq2300 Length=2114 Score = 324 bits (358), Expect = 3e-86 Identities = 280/344 (81%), Gaps = 6/344 (2%) Strand=Plus/Plus Query 13 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 72 |||| |||||||||||||||||||||||||||||||||||||||| || ||||||| || Sbjct 888 AAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCGAGCGTTAATCG 947 Query 73 GAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGG 132 |||||||||||||||||| ||||| ||| ||||| |||| | || |||||| | || Sbjct 948 GAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTTGCTAAGACCGATGTGAAATCCCCGGG 1007 Query 133 CTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGT---GCAGGAGGGGCAAGTGG 189 ||||||| || ||||| || | |||| ||||||||| ||| |||||| || | Sbjct 1008 CTCAACCTGGGAACTGCATTGGTGACTGGCAGGCTAGAGTATGGCA-GAGGGG--GGTAG 1064 Query 190 AATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGG 249 |||||| ||||||| |||||||||||||| || ||||||| ||| |||||||||| | Sbjct 1065 AATTCCACGTGTAGCAGTGAAATGCGTAGAGATGTGGAGGAATACCGATGGCGAAGGCAG 1124 Query 250 CTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATA 309 | |||| | |||||| || | || ||||||||||||||||||||||||||||||| Sbjct 1125 CCCCCTGGGCCAATACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGATA 1184 Query 310 CCCTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCgggg 353 ||||||||||||||||| ||||||||| ||||| ||| |||| Sbjct 1185 CCCTGGTAGTCCACGCCCTAAACGATGTCAACTAGTTGTTGGGG 1228 >seq3047 Length=229 Score = 95.1 bits (104), Expect = 3e-17 Identities = 66/75 (88%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 1 TACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGC 60 ||| || || ||||| |||||||||||||||||||||||||||||||||||||||| | Sbjct 155 TACCTGCAGAAGAAGCGCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGCGT 214 Query 61 TAGCGTTATCCGGAA 75 |||||| ||||||| Sbjct 215 AAGCGTTGTCCGGAA 229 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203124848128