Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178075.1_202017-04- 25] 6,246 sequences; 12,545,896 total letters Query= AAMG01002194.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq1991 340 3e-91 seq4890 125 1e-26 >seq1991 Length=3667 Score = 340 bits (376), Expect = 3e-91 Identities = 271/322 (84%), Gaps = 3/322 (1%) Strand=Plus/Minus Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATA 60 |||||| ||||||||||||||||||| ||||||||||||||||| ||||| ||||| | Sbjct 3636 AGTGCATGTGGTGGATGCCTTGGCGATCACAGGCGATGAAGGACGCGGTAGCCTGCGAAA 3577 Query 61 AGCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGC 120 |||| ||||||| ||||||| |||||||||| |||| ||||||||||||||||| Sbjct 3576 AGCTACGGGGAGCTGGCAAACAAGCTTTGATCCGTAGATGTCCGAATGGGGAAACCCACT 3517 Query 121 CCTTTGGGTCATTGCATG-CTGAATACATAGGT-ATGCAAAGCGAACGCGGCGAACTGAA 178 ||||| || | |||| ||||||||||||| ||| |||||||||||| |||||||| Sbjct 3516 CCTTTTGGAGTATCCATGGCTGAATACATAGGCCATGTGAAGCGAACGCGGTGAACTGAA 3457 Query 179 ACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAA 238 ||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3456 ACATCTAAGTAACCGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAA 3397 Query 239 ATGGGATGAGCCTT-TACGAGATAGTTGAATTGATAGTGGAATCCTCTGGAAATAGGAGC 297 |||||||||||||| || || ||| |||| ||| ||| ||||||||| | || Sbjct 3396 ATGGGATGAGCCTTGCACTCTTTATTTGTATTGTTAGCCGAACGCTCTGGAAAGTGCGGC 3337 Query 298 CATAGCGGGTGATAGCCCCGTA 319 |||||| ||||||||||| ||| Sbjct 3336 CATAGCAGGTGATAGCCCTGTA 3315 >seq4890 Length=333 Score = 125 bits (138), Expect = 1e-26 Identities = 177/250 (71%), Gaps = 24/250 (10%) Strand=Plus/Minus Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATA 60 || ||||| ||||||||||||||| | || ||| ||||||||| ||||| ||||||| Sbjct 241 AGGGCACAGGGTGGATGCCTTGGCACTAGGAGCCGAAGAAGGACGTGGTAGCCTGCGATA 182 Query 61 AGCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGC 120 ||| ||||||| |||||| || ||||||| | ||||||||||||| ||||| || Sbjct 181 AGCCTCGGGGAGCTGGCAAACGAGCTGTGATCCGAGGGTTTCCGAATGGGGGAACCCCGC 122 Query 121 CCTTTGGGTCATTGCATG----------CTGAATACATA-GGTATGCAAAGCGAACGCGG 169 | | ||||| | || ||||||| ||| ||| || || ||||| | Sbjct 121 AC---GAGTCATGTCGTGTGACCCGCACCTGAATATATAGGGTGTGTGGAGGGAACGTCG 65 Query 170 CGAACTGAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTG 229 ||| |||||||||| |||| | |||||| | || ||||| ||||||| Sbjct 64 GGAAGTGAAACATCTCAGTACCGACAGGAAGA----------GATATTCCGTGAGTAGTG 15 Query 230 GCGAGCGAAA 239 |||||||||| Sbjct 14 GCGAGCGAAA 5 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 918342636736