Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178075.1_202017-04- 25] 6,246 sequences; 12,545,896 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq1991 340 6e-91 seq1304 98.7 3e-18 >seq1991 Length=3667 Score = 340 bits (376), Expect = 6e-91 Identities = 417/566 (74%), Gaps = 25/566 (4%) Strand=Plus/Plus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACT--CACCACCTGATTG 58 ||||||||| |||||||||| |||| | ||| ||| || |||| || ||| |||| Sbjct 1306 TCGACTTGTCGGTCTCGCAGTTAAGCACGCTTATGCCATTGCACTATCAGCAC--GATTT 1363 Query 59 CCAACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCC 118 || ||| | || | ||||| | | |||||||||| ||||||||| | ||||||| Sbjct 1364 CCGACCGTACCTAGCGTACCTTCGTACTCCTCCGTTACGCTTTGGGAGGAGA-CCGCCCC 1422 Query 119 AGTTAAACTACCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATATCC 178 ||| ||||| || |||| ||||||||||| |||| ||||| |||||||||||||| | Sbjct 1423 AGTCAAACTGCCTACCATGCACTGTCCCCGACCCGGATCACGGGCCAAGGTTAGAACCTC 1482 Query 179 ACTACGGTCAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCATA 238 | ||| |||||||||||| ||| |||||| |||||||| | | ||||| Sbjct 1483 AAACAAACCAGGGTGGTATTTCAAGGACGGCTCCACCGAAACTAGCGTTCCGGTTTCATA 1542 Query 239 GTCTCCCACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTC 298 | ||||||||||||||||||| | || | || ||||| | |||||| ||| ||||| Sbjct 1543 GCCTCCCACCTATCCTACACAGATCGGTTCAAAGTCCAATGCAAAGCTACAGTAAAGGTT 1602 Query 299 CC-GGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCAC 357 | ||||||||| |||| |||||| | | ||||| | || ||| ||| ||| | Sbjct 1603 CATGGGGTCTTTCCGTCTAGCCGCGGGTAGATTGCATCATCACAAACACTTCAACTTCGC 1662 Query 358 CGGGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTAC 417 | | || || ||||||| || |||||||||||||||||||||||||||||||| Sbjct 1663 TGAGTCTCGGGAGGAGACAGTGTGGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTAC 1722 Query 418 CCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCT 477 ||||||||||||||||||||||||||| ||||||||||| ||||||||||| ||| || Sbjct 1723 CCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACCGGGACT 1782 Query 478 TCAATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCAGCAC 537 ||||| | | || ||| ||| ||| |||| ||||| |||| Sbjct 1783 TCAATCAAGAG-CTTGCACCCCA----------TCA--------TTTAATCTTCCGGCAC 1823 Query 538 CGGGCAGGCGTCAGTCCGTATACCTC 563 ||||||||||||| || ||||| || Sbjct 1824 CGGGCAGGCGTCACACCCTATACGTC 1849 >seq1304 Length=204 Score = 98.7 bits (108), Expect = 3e-18 Identities = 86/106 (81%), Gaps = 6/106 (6%) Strand=Plus/Plus Query 459 ACCGCCGTTTACTGGGGCTTCAATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGT 518 |||||||||||||||||||| |||| || |||| | || | || | || || Sbjct 1 ACCGCCGTTTACTGGGGCTTAAATTCTGAGCTTCACCC----CGAAGGGT--TGACCCGT 54 Query 519 CCTCTTAACCTTCCAGCACCGGGCAGGCGTCAGTCCGTATACCTCG 564 |||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 55 CCTCTTAACCTTCCAGCACCGGGCAGGCGTCAGTCCGTATACATCG 100 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1702293668096