Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178145.1_202017-04- 22] 2,876 sequences; 12,267,831 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq545 140 3e-28 seq44 120 2e-22 seq1930 116 3e-21 >seq545 Length=90069 Score = 140 bits (154), Expect = 3e-28 Identities = 394/605 (65%), Gaps = 0/605 (0%) Strand=Plus/Plus Query 66320 CCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCG 66379 |||| | ||| ||||| ||| || |||||||| ||||| || || ||| | ||| Sbjct 65902 CCATTTTCTTCGACACGCTTCATGAAAAGATCAGGAATCCATAGAGCAGGGAACAAATCT 65961 Query 66380 CGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCG 66439 | ||| || ||||| | ||||| || || | | || | || ||||| || || Sbjct 65962 CTTGCACGAATTTCCTCTTTACCGTGGTTCTTCCTAATATCAATAAAATCAAATATATCA 66021 Query 66440 GCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCG 66499 |||||||||||||||||||| | ||| |||| || | ||| ||||| ||||| Sbjct 66022 GCATGCCATGGTTCCAGGTAAAGGGCAAACGCACCAGGTCTTTTATTACCACCCTGGTCA 66081 Query 66500 ACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCA 66559 || ||||| || || ||||| ||||| | ||| || | | |||||||| | || Sbjct 66082 ACATAGCGGGCAGTGTTATTGAAAACACGAATCATAGGAATTAAACCGTTAGAAGTACCG 66141 Query 66560 TTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCA 66619 || || || | ||| || || || || || | || | || |||||||||||| Sbjct 66142 TTTGTACCAGCAATGTAAGAACCAGTTGAACGAATGTTATGGATATGTAGACCAATACCA 66201 Query 66620 CCGGCCGTCTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGGAG 66679 || || || || || || |||||| || || || | | || || || || ||| Sbjct 66202 CCAGCAGTTTTGGAAATCAAAGCACATTCCTTCAAGGTGTCGTAAATCCCCTCGATAGAG 66261 Query 66680 TCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAG 66739 || |||| |||| | | | | || || | ||| ||||| || || |||| | Sbjct 66262 TCCTCCTTCATGGCAACCAAGAAACAAGAGGACATTTGAGGTTTTGGAGTACCGGCATTG 66321 Query 66740 AAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATG 66799 || | || || | ||||| ||||| || | ||||||| | || ||||| || | Sbjct 66322 AACAACGTTGGAGAGGCGTGAGTAAAATATTTTAGAGACATCAAGTTATACGTTTCTAAA 66381 Query 66800 ACAGCATCAATGTTTTCGCCATGAATCCCGAGTGCACATCGCATCAGGAGGTATTGAGGC 66859 |||| || || | | || || || || ||||| || ||| | | | ||| || Sbjct 66382 GCAGCCTCGATATCTCTACCGTGGATGCCTAGTGCGACTCTCATAATTAAATGTTGTGGA 66441 Query 66860 CGTTCGACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACCA 66919 |||||| ||| || | ||||| | ||| || || ||||||| || || | |||| Sbjct 66442 CGTTCGGCCACTTGACCGTTGATTCTTAGTAAATAAGAACGTTCCAAAGTTTTAAAACCA 66501 Query 66920 AAGTA 66924 || || Sbjct 66502 AAATA 66506 >seq44 Length=37901 Score = 120 bits (132), Expect = 2e-22 Identities = 371/569 (65%), Gaps = 15/569 (3%) Strand=Plus/Plus Query 61066 TTCCCCATCGAGTATGAGGATATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGG 61125 ||||| ||| |||| | || || |||| ||||| || |||||||| |||||| Sbjct 36951 TTCCCTATCAAGTACCATGAAATCTGGCAAGCCTACAAGCGTGCCGAAGCTTCTTTCTGG 37010 Query 61126 ACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACTGGGAGCGTTTATCGAGCGGT 61185 || | || || | |||||||| || || || |||||||| | | || || Sbjct 37011 ACCGCTGAAGAAATTGATTTGTCTAAGGATATCCATGACTGGAACAACAGAATGAACGA- 37069 Query 61186 GAACAACA----TTTCATTAAACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGT 61241 |||| | | ||||||| || | || || || |||||||| |||||||| || Sbjct 37070 GAACGAGAGATTTTTCATTTCCAGAGTTCTTGCCTTTTTCGCCGCTTCTGACGGTATTGT 37129 Query 61242 CAATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTT 61301 ||||| || || | ||| ||| | || || ||| | | ||||| |||| Sbjct 37130 TAATGAAAACTTGGTTGAAAACTTCTCCACCGAAGTCCAAATTCCAGAGGCAAAGAGTTT 37189 Query 61302 CTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGA 61361 |||||| ||||| || || || ||| | ||||| || | ||| | | ||||| Sbjct 37190 CTACGGTTTCCAAATCATGATTGAAAATATTCACTCTGAAACTTACTCCTTGTTGATCGA 37249 Query 61362 TACGTACATCAGGGAGCGGGCGGAACGTGAACGATTGTTCAATGCCATCGAGACGATACC 61421 ||| ||||||| ||| | ||| ||||| |||||||||||||| | || || || Sbjct 37250 TACTTACATCAAGGACCCTAAAGAAAGTGAATTCTTGTTCAATGCCATTCACACCATTCC 37309 Query 61422 GG----CGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGA-TCACCAGTACAACGGCT 61476 | |||||| ||| || || ||||| || | |||| ||| | ||| || Sbjct 37310 AGAAATCGGTGA----GAAGGCCGAATGGGCTTTAAGATGGATTCAAGACGCTGACGCCT 37365 Query 61477 ACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCG 61536 ||||||||| || | | || ||||| | || ||||| |||||| || || Sbjct 37366 -TGTTTGGTGAAAGACTAGTTGCCTTTGCCTCCATTGAAGGTGTCTTTTTCTCCGGTTCC 37424 Query 61537 TTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAAT 61596 |||||| | || || |||||||| || | || | ||||||||| | ||||| ||| Sbjct 37425 TTTGCCTCCATTTTCTGGTTGAAAAAGAGAGGTATGATGCCCGGTTTAACCTTTTCCAAC 37484 Query 61597 GAGTTGATATCACGCGACGAGGGCATGCA 61625 || ||||| | | ||||| || |||| Sbjct 37485 GAATTGATCTGTAGAGACGAAGGTTTGCA 37513 >seq1930 Length=190809 Score = 116 bits (128), Expect = 3e-21 Identities = 415/644 (64%), Gaps = 10/644 (2%) Strand=Plus/Plus Query 66320 CCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCG 66379 ||||||| || ||||| ||| || |||||||| ||||| || || ||| | ||| Sbjct 180940 CCATCCTCTTGAACACGTTTCATGAAAAGATCAGGGATCCATAGAGCAGGGAACAAATCT 180999 Query 66380 CGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCG 66439 | ||| || || || | || || |||| | | |||| || || ||||| || Sbjct 181000 CTTGCACGAATTTCTTCCTTACCATGTGTTTTTCTGATATCGACAAAGTCGAAGATATCT 181059 Query 66440 GCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCG 66499 ||||||||||| |||| | | | |||||| | || | ||| ||||| ||||| Sbjct 181060 GCATGCCATGGCTCCAAGAAAAGGGCGAAAGCACCAGGTCTCTTGTTACCACCCTGGTCC 181119 Query 66500 ACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCA 66559 || || || || ||| ||||| ||||| | ||| || | | |||||| || | || Sbjct 181120 ACATAACGGGCAGTATTATTGAAAACACGAATCATAGGAATCAACCCGTTTGAAGTACCG 181179 Query 66560 TTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCA 66619 ||||| || |||| || ||| | || || | || | || ||||||| |||| Sbjct 181180 TTGGTACCAGCGATATAAGAACCTGTGGAACGGATGTTGTTGATATGAAGACCAACACCA 181239 Query 66620 CCGGCCGTCTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGGAG 66679 || || || || || || |||||| || || || | || || || || ||| Sbjct 181240 CCTGCAGTTTTGGAAATCATAGCACATTCTTTCAAAGTATCATAAATACCTTCGATAGAG 181299 Query 66680 TCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAG 66739 ||| |||| |||| | | | | |||||| | ||| || | || || | || | Sbjct 181300 TCATCCTTCATGGCAATTAAGAAACATGAAGACATTTGAGGATGTGGCGTACCAGCGTTG 181359 Query 66740 AAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATG 66799 || | || || | |||||| || ||||| ||||| |||| || |||| | Sbjct 181360 AATAAAGTTGGGGAAGCGTGAGTGAAGTATCTTAACGACATCAAATTATAAGTCTTCAGC 181419 Query 66800 ACAGCATCAATGTTTTCGCCATGAATCCCGAGTG-CACATCGCATCAGGAGGTATTGAGG 66858 |||| || || | ||||| || || || | |||| ||||| | | | ||||| Sbjct 181420 ACAGATTCGATATCGCTACCATGGATACCTAGCGCCACA-CGCATTACCAAATGCTGAGG 181478 Query 66859 CCGTTCGACCA----GCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGA 66914 ||||| ||| ||| || | || || ||||| || || ||||| ||||||| Sbjct 181479 ACGTTCTGCCACTTCACCGTTCAGTCTTA-GC---AAGTACGAACGCTCCAGTGTCTTGA 181534 Query 66915 TACCAAAGTACGAGTAATTGAAATCGTTAGCATGCACGATGGCC 66958 || || |||| || | |||||| || | | |||||||||| Sbjct 181535 ATCCGAAATACGTATACTGGAAATCCCTATCGTACACGATGGCC 181578 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397554064744640