Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178165.1_202017-04- 21] 1,545 sequences; 11,875,116 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq744 767 0.0 seq150 141 3e-31 seq11 129 2e-27 >seq744 Length=2756 Score = 767 bits (850), Expect = 0.0 Identities = 491/528 (93%), Gaps = 9/528 (2%) Strand=Plus/Plus Query 20 GGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGGTTTAACAGATGT 79 |||||||||||||||||||||| ||||||||||||| ||||||||| ||||||||||||| Sbjct 3 GGAGATTTCTGTTCTCCATGAGCCCCCCTTAGGACATCTGCGTTATCGTTTAACAGATGT 62 Query 80 GCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATCGGCCCGCGAA--G 137 |||||||||||||||||||||||||||||||||| |||||||||||| |||| |||| | Sbjct 63 GCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCGGATCAGCCC-CGAATGG 121 Query 138 GACCTT-AACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGATTAAGTaaaa 196 |||||| || || |||| ||| |||| |||| ||||||||||||| |||||||| Sbjct 122 GACCTTGAATGCTAGAACGTGGAAAATGAATTCCAGCTCCGCTTCATTGAATAAGTAAAG 181 Query 197 aaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTATTCTACA-CC 255 |||| |||| ||||||||||||||||| |||||||| |||||||||||||||||| || Sbjct 182 AAACTATAAAGGTAGTGGTATTTCACTGGCGCCGAA---GCTCCCACTTATTCTACACCC 238 Query 256 TCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGC 315 ||| | ||| ||||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct 239 TCT-ATGTCTCTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGC 297 Query 316 TGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTG 375 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 298 TGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTG 357 Query 376 GGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCT 435 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 358 GGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCT 417 Query 436 TAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGA 495 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 418 TAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGA 477 Query 496 CATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 478 CATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 525 >seq150 Length=961 Score = 141 bits (156), Expect = 3e-31 Identities = 86/91 (95%), Gaps = 0/91 (0%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| ||||| |||||||||||||||||||||| ||||||||||||| ||||||||| Sbjct 91 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGCCCCCCTTAGGACATCTGCGTTATC 32 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTC 97 ||||||||||||||||||||||||||||||| Sbjct 31 GTTTAACAGATGTGCCGCCCCAGCCAAACTC 1 >seq11 Length=177817 Score = 129 bits (142), Expect = 2e-27 Identities = 77/81 (95%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 20 GGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGGTTTAACAGATGT 79 |||||||||||||||||||||| ||||||||||||| ||||||||| ||||||||||||| Sbjct 3 GGAGATTTCTGTTCTCCATGAGCCCCCCTTAGGACATCTGCGTTATCGTTTAACAGATGT 62 Query 80 GCCGCCCCAGCCAAACTCCCC 100 |||||||||||||||||| || Sbjct 63 GCCGCCCCAGCCAAACTCTCC 83 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635174736160