Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178185.1_202017-04- 22] 4,008 sequences; 12,879,491 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq3744 379 4e-103 seq3587 239 8e-61 >seq3744 Length=1142 Score = 379 bits (420), Expect = 4e-103 Identities = 270/305 (89%), Gaps = 6/305 (2%) Strand=Plus/Minus Query 15 GGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTT 74 |||||||||||||||| | || | |||| ||| | | || || ||||||||| Sbjct 424 GGGCCTTTCCTTCTGGCTAACCTTGAGTCCTTG--TGGCTCTT--GGCGAACCAGGACTT 369 Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCT-TTGCTCGAATACATTAGCATGGA 133 |||||||||||||||||||||||||||||||||| | ||||||||||| ||||||||||| Sbjct 368 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCGTATTGCTCGAATATATTAGCATGGA 309 Query 134 ATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAA 193 ||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||| Sbjct 308 ATAATAGAATAGGACGTTTGGTTCTATTTTGTTGGTTTCTAGGACCATCGTAATGATTAA 249 Query 194 TAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGA 253 |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 248 TAGGGACGGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGA 189 Query 254 AGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTT 313 |||||||||||||||||||| || ||||||| |||||||||||||| ||||||||||| Sbjct 188 AGACTAACTACTGCGAAAGCATTTGCCAAGGACGTTTTCATTAATCA-AGAACGAAAGTT 130 Query 314 AGGGG 318 ||||| Sbjct 129 AGGGG 125 >seq3587 Length=680 Score = 239 bits (264), Expect = 8e-61 Identities = 210/257 (82%), Gaps = 5/257 (2%) Strand=Plus/Plus Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTT--TGCTCGAATAC 122 ||||| | ||||||||||||||||||||||| ||||||||||| ||| ||||| Sbjct 68 GCCAGCAGGTTTACTTTGAAAAAATTAGAGTGCTCAAAGCAGGCTAAAATGCCTGAATAT 127 Query 123 ATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACC-GC 181 ||||||||||||||||||||| || || | ||||||||||||||| |||| | Sbjct 128 TCGTGCATGGAATAATAGAATAGGATGT-CGATCCTATTTTGTTGGTTTTCGGGACTTGA 186 Query 182 CGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCT 241 | |||||||||||||||| ||||||||| | |||||||| | ||||||||||||||| Sbjct 187 CATAATGATTAATAGGGACAGTCGGGGGCATTTGTATTCAAACGACAGAGGTGAAATTCT 246 Query 242 TGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAG 301 |||| |||||||| ||||||||||||||| || ||||| |||||||||||||||| Sbjct 247 TGGACCGTTTGAAGACAAACTACTGCGAAAGCATTTGCCAAGAATGTTTTCATTAATCA- 305 Query 302 TGAACGAAAGTTAGGGG 318 ||||||||||||| || Sbjct 306 AGAACGAAAGTTAGAGG 322 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915163318784