Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178185.1_202017-04-
22] 4,008 sequences; 12,879,491 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq3940 668 0.0
seq772 172 2e-40
seq3123 127 9e-27
>seq3940
Length=2387
Score = 668 bits (740), Expect = 0.0
Identities = 556/670 (83%), Gaps = 15/670 (2%)
Strand=Plus/Plus
Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82
||| ||| ||||||| |||||||||||||||||||||||||||||| |||| |||||||
Sbjct 319 TGTAAAGTGCCTTCGAAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAAT 378
Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142
| | ||||||||||||||||||| |||||||||||||| ||||||| |||||| ||||||
Sbjct 379 TCCATCTAAAGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGA 438
Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202
||||||| |||||| ||||||||| |||||| ||||||||||||||||||||||| || |
Sbjct 439 TGAAAAGAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCAT 498
Query 203 GCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCG--GTGCACTCTTCTGCG 260
| ||||| || ||| | | || ||| | | | | | ||| |
Sbjct 499 TTGATCAGACATGGTGTTTTGTGCCCT--CTGCTCCTTGTGGGTAGGGGAATCT-CGCAT 555
Query 261 GTCA---GGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTT 317
||| |||||||||||| | || || ||||||| || ||||||| || | |
Sbjct 556 TTCACTGGGCCAGCATCAGTTTTGGTGGCAGGATAAAT-CCATAGGAATGTAGCTTGCCT 614
Query 318 CGGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC--TCC 375
||| || |||||||| | || |||| | ||| || ||||||||| | ||| |
Sbjct 615 CGGTAAGTATTATAGCCTGTGG--GAATACTGCCAGCTGGGACTGAGGACTGCGACGTAA 672
Query 376 GGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTC 435
| | ||||||||||| |||||||| || || |||||||||| ||||||||||||||||||
Sbjct 673 GTCAAGGATGCTGGCATAATGGTTATATGCCGCCCGTCTTGAAACACGGACCAAGGAGTC 732
Query 436 TAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGT 495
|||| ||||||||||||||||||||| |||||| | ||||||||||||||||||| ||||
Sbjct 733 TAACGTCTATGCGAGTGTTTGGGTGTAAAACCCATACGCGTAATGAAAGTGAACGTAGGT 792
Query 496 GGGAACC-CGTGAG-GGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTA 553
|| || || || ||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 793 TGGGGCCTCGCAAGAGGTGCACAATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTA 852
Query 554 AGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGA 613
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 853 AGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGA 912
Query 614 GGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGT 673
||||||||||||||||||||| |||||||||| ||||||||||||||||| |||||||||
Sbjct 913 GGAAACTCTGGTGGAGGCTCGTAGCGGTTCTGACGTGCAAATCGATCGTCGAATTTGGGT 972
Query 674 ATAGGGGCGA 683
||||||||||
Sbjct 973 ATAGGGGCGA 982
>seq772
Length=900
Score = 172 bits (190), Expect = 2e-40
Identities = 221/299 (74%), Gaps = 22/299 (7%)
Strand=Plus/Minus
Query 405 CGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGT-GTCA 463
|| ||||||||| |||||||||||||||||||||||| |||||||| |||||| | |
Sbjct 645 CGACCCGTCTTGAAACACGGACCAAGGAGTCTAACATGTATGCGAGCCATTGGGTTGACT 586
Query 464 AACCCGTGCG-CGTAATGAAAGTGAACGG-AGGT-----------GGGA--ACCCGTGAG 508
|| || ||| || | |||||| || || || | |||| | |||| ||
Sbjct 585 AAACCTAGCGGCGCAGTGAAAGCAAAGGGTAGCTTGTCTGCCCGAGGGAGGATCCGTAAG 526
Query 509 G-GTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTA---AGAGCATAGCT 564
| | | || |||| ||| || | ||| | | ||||| |||||||| |
Sbjct 525 GCGCACTCCCGCGACT--TCCAATTGACCTCGCTTCATTGGGAGTACGCAGAGCATAAAT 468
Query 565 GTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGG 624
|||||||||||||||||||||||||||||||| ||| ||||| ||| |||||| |||
Sbjct 467 GTTGGGACCCGAAAGATGGTGAACTATGCCTGGCCAGGTTGAAGTCAGGGGAAACCCTGA 408
Query 625 TGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
|||||| || |||| ||||| ||||||||||||||||| | |||||||||||||||
Sbjct 407 TGGAGGACCGTAGCGATTCTGACGTGCAAATCGATCGTCGGAGCTGGGTATAGGGGCGA 349
>seq3123
Length=333
Score = 127 bits (140), Expect = 9e-27
Identities = 119/149 (80%), Gaps = 2/149 (1%)
Strand=Plus/Plus
Query 39 CGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAA 98
||||||| |||| |||||| |||||| | || || |||||||| | || ||| |||||
Sbjct 112 CGAGTCGGGTTGCTTGGGAGTGCAGCCCAAAGTGTGAGGTAAACTCCTCATAAGCCTAAA 171
Query 99 TATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA-TGAAAAGCACTTTGG 157
|||| || |||||||||||| ||||||| |||| || |||| ||||||| ||||||
Sbjct 172 TATTACCCTGAGACCGATAGCAAACAAGTACGGTGA-CGGAAGATTGAAAAGAACTTTGA 230
Query 158 AAAGAGAGTTAAAAAGCACGTGAAATTGT 186
| |||||||| || || |||||||| |||
Sbjct 231 AGAGAGAGTTCAATAGTACGTGAAACTGT 259
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079914028400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |