Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178185.1_202017-04- 22] 4,008 sequences; 12,879,491 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq3744 149 7e-34 seq3587 98.7 1e-18 >seq3744 Length=1142 Score = 149 bits (164), Expect = 7e-34 Identities = 102/114 (89%), Gaps = 1/114 (1%) Strand=Plus/Plus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||||||||||||||||||| | |||||||||||||||||||||||||||| |||||| Sbjct 267 CTAGAAACCAACAAAATAGAACCAAACGTCCTATTCTATTATTCCATGCTAATATATTCG 326 Query 66 GGC-GTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTC 118 || || |||||||||||||||||||||||| |||| |||||||||||||||| Sbjct 327 AGCAATACGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGTCCTGGTTC 380 >seq3587 Length=680 Score = 98.7 bits (108), Expect = 1e-18 Identities = 88/108 (81%), Gaps = 3/108 (3%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 |||||||||||||||| || || ||||||||||||||||||||| ||||| ||| Sbjct 175 AAACCAACAAAATAGGATCG-ACATCCTATTCTATTATTCCATGCACGAATATTCAGGCA 117 Query 70 TA--AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGG 115 | |||||||||||| |||||||||||| |||| ||||| | |||| Sbjct 116 TTTTAGCCTGCTTTGAGCACTCTAATTTTTTCAAAGTAAACCTGCTGG 69 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595176889872