Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178185.1_202017-04- 22] 4,008 sequences; 12,879,491 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq3293 585 9e-165 seq2640 471 1e-130 seq3940 282 1e-73 seq189 268 3e-69 seq3677 141 3e-31 seq88 141 3e-31 >seq3293 Length=427 Score = 585 bits (648), Expect = 9e-165 Identities = 393/432 (91%), Gaps = 9/432 (2%) Strand=Plus/Minus Query 8 TTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGG 67 ||||| ||||| |||||||||||||||||||||| ||||||||||||| ||||||||| | Sbjct 427 TTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGCCCCCCTTAGGACATCTGCGTTATCG 368 Query 68 TTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATCG 127 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 367 TTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCGGATCA 308 Query 128 GCCCGCGAA--GGACCTT-AACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATT 184 |||| |||| ||||||| || || |||| ||| |||| |||| ||||||||||| Sbjct 307 GCCC-CGAATGGGACCTTGAATGCTAGAACGTGGAAAATGAATTCCAGCTCCGCTTCATT 249 Query 185 GATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACT 244 || |||||||| |||| |||| ||||||||||||||||| |||||||| ||||||||| Sbjct 248 GAATAAGTAAAGAAACTATAAAGGTAGTGGTATTTCACTGGCGCCGAA---GCTCCCACT 192 Query 245 TATTCTACACCTCTCAA-GTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTC 303 ||||||||||| ||| | ||| ||||||| ||| |||||||||||||||||||||||| Sbjct 191 TATTCTACACC-CTCTATGTCTCTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTC 133 Query 304 TTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAG 363 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 132 TTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAG 73 Query 364 ATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGC 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 72 ATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGC 13 Query 424 ATTTGGCTACCT 435 |||||||||||| Sbjct 12 ATTTGGCTACCT 1 >seq2640 Length=1608 Score = 471 bits (522), Expect = 1e-130 Identities = 437/549 (80%), Gaps = 15/549 (3%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||||||||| |||||||| |||||| |||| |||||||||||||||||||| Sbjct 909 CTTTTGCTCTACGTGAGATTTCCGTTCTCACTGAGCTGGCCTTAGGACACCTGCGTTATC 850 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||| |||||||| ||||||||| |||||||||| ||| ||||||| | | ||| Sbjct 849 ATTTGACAGATGTACCGCCCCAGTCAAACTCCCCGCCTCGCAATGTCCACGGAGTGAATC 790 Query 127 ---GGCCCGCGAAGGACCT------TAACGCCAGAAAATGGTCGGTGAAG--ACCAGTTC 175 || | | | ||| | | || ||||| | || |||| || | || Sbjct 789 ACAGGAGAGAACAAGCCCTCCCATTTGAGGCTAGAAATAGTTCCC-GAAGGCACTAATTT 731 Query 176 CGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACT-TGCGCCGAAAC 234 | | | | | |||| | | | |||| |||| |||||||||| | |||||| | Sbjct 730 CACCTAACCGTGTAAGCAGAGGAGCGATTTTTGTAGGAGTATTTCACTGTTGGCCGAAGC 671 Query 235 GGCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTC 294 |||| | |||||||| || | | | |||||| |||||||||||||||| Sbjct 670 --CTCCTCCCTATTCTACGCCAAAAATGCTCCTCCACAAAAGGAGACTAGAGTCAAGCTC 613 Query 295 AACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCT 354 ||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||| Sbjct 612 AACAGGGTCTTCTTTCCCCGCTGATCTTCCCAAGTCCGTTCCCTTGGCTGCGGTTTCGCT 553 Query 355 AGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGA 414 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 552 AGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGCCACTAATTAGA 493 Query 415 TGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTT 474 || |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 492 TGGCGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCTGCGCTT 433 Query 475 GGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACAT 534 || |||| |||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 432 GGACGAATCTCTTCACTTTGACATTCAAAGCACTGGGCAGAAATCACATTGCGTCAACAT 373 Query 535 CACTTTCTG 543 |||| |||| Sbjct 372 CACTCTCTG 364 >seq3940 Length=2387 Score = 282 bits (312), Expect = 1e-73 Identities = 156/156 (100%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 388 ATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCAT 447 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2387 ATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCAT 2328 Query 448 AGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCAC 507 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2327 AGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCAC 2268 Query 508 TGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543 |||||||||||||||||||||||||||||||||||| Sbjct 2267 TGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 2232 >seq189 Length=205 Score = 268 bits (296), Expect = 3e-69 Identities = 153/156 (98%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 388 ATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCAT 447 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 205 ATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCAT 146 Query 448 AGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCAC 507 |||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| Sbjct 145 AGTTACTCCCGCCGTTTACCCGCGCTTGGTCGAATCTCTTCACTTTGACATTCAGAGCAC 86 Query 508 TGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543 ||||||||||||||||||||||||||||||| |||| Sbjct 85 TGGGCAGAAATCACATTGCGTCAACATCACTCTCTG 50 >seq3677 Length=906 Score = 141 bits (156), Expect = 3e-31 Identities = 86/91 (95%), Gaps = 0/91 (0%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| ||||| |||||||||||||||||||||| ||||||||||||| ||||||||| Sbjct 91 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGCCCCCCTTAGGACATCTGCGTTATC 32 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTC 97 ||||||||||||||||||||||||||||||| Sbjct 31 GTTTAACAGATGTGCCGCCCCAGCCAAACTC 1 >seq88 Length=24671 Score = 141 bits (156), Expect = 3e-31 Identities = 87/93 (94%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 8 TTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGG 67 ||||| ||||| |||||||||||||||||||||| ||||||||||||| ||||||||| | Sbjct 1 TTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGCCCCCCTTAGGACATCTGCGTTATCG 60 Query 68 TTTAACAGATGTGCCGCCCCAGCCAAACTCCCC 100 |||||||||||||||||||||||||||||| || Sbjct 61 TTTAACAGATGTGCCGCCCCAGCCAAACTCTCC 93 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635134461184