Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178185.1_202017-04-
22] 4,008 sequences; 12,879,491 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq3293 585 9e-165
seq2640 471 1e-130
seq3940 282 1e-73
seq189 268 3e-69
seq3677 141 3e-31
seq88 141 3e-31
>seq3293
Length=427
Score = 585 bits (648), Expect = 9e-165
Identities = 393/432 (91%), Gaps = 9/432 (2%)
Strand=Plus/Minus
Query 8 TTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGG 67
||||| ||||| |||||||||||||||||||||| ||||||||||||| ||||||||| |
Sbjct 427 TTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGCCCCCCTTAGGACATCTGCGTTATCG 368
Query 68 TTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATCG 127
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 367 TTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCGGATCA 308
Query 128 GCCCGCGAA--GGACCTT-AACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATT 184
|||| |||| ||||||| || || |||| ||| |||| |||| |||||||||||
Sbjct 307 GCCC-CGAATGGGACCTTGAATGCTAGAACGTGGAAAATGAATTCCAGCTCCGCTTCATT 249
Query 185 GATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACT 244
|| |||||||| |||| |||| ||||||||||||||||| |||||||| |||||||||
Sbjct 248 GAATAAGTAAAGAAACTATAAAGGTAGTGGTATTTCACTGGCGCCGAA---GCTCCCACT 192
Query 245 TATTCTACACCTCTCAA-GTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTC 303
||||||||||| ||| | ||| ||||||| ||| ||||||||||||||||||||||||
Sbjct 191 TATTCTACACC-CTCTATGTCTCTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTC 133
Query 304 TTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAG 363
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 132 TTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAG 73
Query 364 ATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGC 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 72 ATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGC 13
Query 424 ATTTGGCTACCT 435
||||||||||||
Sbjct 12 ATTTGGCTACCT 1
>seq2640
Length=1608
Score = 471 bits (522), Expect = 1e-130
Identities = 437/549 (80%), Gaps = 15/549 (3%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
|||||||||||| |||||||| |||||| |||| ||||||||||||||||||||
Sbjct 909 CTTTTGCTCTACGTGAGATTTCCGTTCTCACTGAGCTGGCCTTAGGACACCTGCGTTATC 850
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
||| |||||||| ||||||||| |||||||||| ||| ||||||| | | |||
Sbjct 849 ATTTGACAGATGTACCGCCCCAGTCAAACTCCCCGCCTCGCAATGTCCACGGAGTGAATC 790
Query 127 ---GGCCCGCGAAGGACCT------TAACGCCAGAAAATGGTCGGTGAAG--ACCAGTTC 175
|| | | | ||| | | || ||||| | || |||| || | ||
Sbjct 789 ACAGGAGAGAACAAGCCCTCCCATTTGAGGCTAGAAATAGTTCCC-GAAGGCACTAATTT 731
Query 176 CGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACT-TGCGCCGAAAC 234
| | | | | |||| | | | |||| |||| |||||||||| | |||||| |
Sbjct 730 CACCTAACCGTGTAAGCAGAGGAGCGATTTTTGTAGGAGTATTTCACTGTTGGCCGAAGC 671
Query 235 GGCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTC 294
|||| | |||||||| || | | | |||||| ||||||||||||||||
Sbjct 670 --CTCCTCCCTATTCTACGCCAAAAATGCTCCTCCACAAAAGGAGACTAGAGTCAAGCTC 613
Query 295 AACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCT 354
||||||||||||||||||||||||| ||||| ||||||||||||||| |||||||||
Sbjct 612 AACAGGGTCTTCTTTCCCCGCTGATCTTCCCAAGTCCGTTCCCTTGGCTGCGGTTTCGCT 553
Query 355 AGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGA 414
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 552 AGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGCCACTAATTAGA 493
Query 415 TGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTT 474
|| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 492 TGGCGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCTGCGCTT 433
Query 475 GGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACAT 534
|| |||| |||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 432 GGACGAATCTCTTCACTTTGACATTCAAAGCACTGGGCAGAAATCACATTGCGTCAACAT 373
Query 535 CACTTTCTG 543
|||| ||||
Sbjct 372 CACTCTCTG 364
>seq3940
Length=2387
Score = 282 bits (312), Expect = 1e-73
Identities = 156/156 (100%), Gaps = 0/156 (0%)
Strand=Plus/Minus
Query 388 ATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCAT 447
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2387 ATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCAT 2328
Query 448 AGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCAC 507
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2327 AGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCAC 2268
Query 508 TGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543
||||||||||||||||||||||||||||||||||||
Sbjct 2267 TGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 2232
>seq189
Length=205
Score = 268 bits (296), Expect = 3e-69
Identities = 153/156 (98%), Gaps = 0/156 (0%)
Strand=Plus/Minus
Query 388 ATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCAT 447
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 205 ATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCAT 146
Query 448 AGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCAC 507
|||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||
Sbjct 145 AGTTACTCCCGCCGTTTACCCGCGCTTGGTCGAATCTCTTCACTTTGACATTCAGAGCAC 86
Query 508 TGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543
||||||||||||||||||||||||||||||| ||||
Sbjct 85 TGGGCAGAAATCACATTGCGTCAACATCACTCTCTG 50
>seq3677
Length=906
Score = 141 bits (156), Expect = 3e-31
Identities = 86/91 (95%), Gaps = 0/91 (0%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
|||||| ||||| |||||||||||||||||||||| ||||||||||||| |||||||||
Sbjct 91 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGCCCCCCTTAGGACATCTGCGTTATC 32
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTC 97
|||||||||||||||||||||||||||||||
Sbjct 31 GTTTAACAGATGTGCCGCCCCAGCCAAACTC 1
>seq88
Length=24671
Score = 141 bits (156), Expect = 3e-31
Identities = 87/93 (94%), Gaps = 0/93 (0%)
Strand=Plus/Plus
Query 8 TTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGG 67
||||| ||||| |||||||||||||||||||||| ||||||||||||| ||||||||| |
Sbjct 1 TTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGCCCCCCTTAGGACATCTGCGTTATCG 60
Query 68 TTTAACAGATGTGCCGCCCCAGCCAAACTCCCC 100
|||||||||||||||||||||||||||||| ||
Sbjct 61 TTTAACAGATGTGCCGCCCCAGCCAAACTCTCC 93
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1635134461184
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |