Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178185.1_202017-04- 22] 4,008 sequences; 12,879,491 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq3677 221 2e-55 seq2661 163 5e-38 >seq3677 Length=906 Score = 221 bits (244), Expect = 2e-55 Identities = 230/293 (78%), Gaps = 18/293 (6%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||| | | ||| || |||||||||||||||||||||||| |||||| | Sbjct 415 GTACGAGAGGAACAGTTCA-TTCGGA-TAATTGGTTTTTGCGGCTGTCTGATCAGGCATT 472 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | Sbjct 473 GCCGCGAAGCTACCATCCGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCTA 532 Query 121 GAACGGGGTGA-TTCTCTCCT--GCACATCGTAGTCGGATACGAAT-AGGCTT------- 169 ||||| ||||| |||| | || |||| ||| |||||||||| |||| | Sbjct 533 GAACGCGGTGATTTCTTTGCTCCACACAATATAGATGGATACGAATAAGGCGTCCTTGTG 592 Query 170 -CGGCCCCGAACCTTAGCAGGCCGGCAACGG-GCGTCCCGCGGAA--GCGCGGGGCGCTC 225 || | | ||||| |||||||| ||||||| || |||||| || ||| ||| Sbjct 593 GCGTCGCTGAACCATAGCAGGCTAGCAACGGTGCACTTGGCGGAAAGGCCTTGGGTGCT- 651 Query 226 AGCTGGCGGATTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 ||||||| |||||||| ||| |||| |||||||||| |||| | ||||| Sbjct 652 TGCTGGCGAATTGCAATGTCATTTTGCGTGGGGATAAATCATTTGTATACGAC 704 >seq2661 Length=274 Score = 163 bits (180), Expect = 5e-38 Identities = 183/238 (77%), Gaps = 15/238 (6%) Strand=Plus/Minus Query 55 GGCAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 |||| |||||||| ||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 268 GGCATTGCCGCGACGCTACCATCCGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 209 Query 115 ATGCCAGAACGGGGTGATTCTCT-CCT-GCACATCGTAGTCGGATACGAAT-AGGCTT-- 169 |||| |||||| ||||||||| | ||| |||| |||| |||||||||| |||| | Sbjct 208 ATGCTAGAACGCGGTGATTCTTTGCCTCACACAAGGTAGATGGATACGAATAAGGCGTCC 149 Query 170 ------CGGCCCCGAACCTTAGCAGGCCGGCAACGG-GCGTCCCGCGGAA--GCGCGGGG 220 || | | | ||| |||| |||||||||||| || |||||| || ||| Sbjct 148 TTGTGACGCCGCTGGACCATAGCGGGCCGGCAACGGTGCTCTTGGCGGAAAGGCCTTGGG 89 Query 221 CGCTCAGCTGGCGGATTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 ||| || ||||||| ||||| ||| || | |||||||||| |||| | ||||| Sbjct 88 TGCT-TGCCGGCGGATAGCAATGTCATTTTGAGTGGGGATAAATCATTTGTATACGAC 32 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819168192512