Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178185.1_202017-04-
22] 4,008 sequences; 12,879,491 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq3744 733 0.0
seq2867 360 6e-97
seq865 84.2 7e-14
>seq3744
Length=1142
Score = 733 bits (812), Expect = 0.0
Identities = 471/508 (93%), Gaps = 6/508 (1%)
Strand=Plus/Plus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
|||||||||||||||||||||||| || | |||||||||| ||||||||||||||||||
Sbjct 593 GTACTCATTCCAATTACAAGACCCGAATGGGCCCTGTATCGTTATTTATTGTCACTACCT 652
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
||| | | ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 653 CCCTGAATTAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 712
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
|||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||
Sbjct 713 TCTCAGGCTCCCTCTCCGGAATCGAACCCTTATTCCCCGTTACCCGTTGAAACCATGGTA 772
Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 773 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCAGCA 832
Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300
||||||||||||||||| |||||||||||||||| ||| ||| ||||| | | ||| |
Sbjct 833 CAAGGCCATGCGATTCGAAAAGTTATTATGAATCATCAAAGAG-TCCGAA-GACATTGAT 890
Query 301 TTTTTATCTAATAAATACACCCCTTCCGAA--GTCGGGGTTTTTAGCATGTATTAGCTCT 358
||||||||||||||||||| | ||||| || |||| | |||| ||||||||||||||||
Sbjct 891 TTTTTATCTAATAAATACATCTCTTCCAAAGGGTCGAGATTTTAAGCATGTATTAGCTCT 950
Query 359 AGAATTACCACGGTTAT-CCATGTAGT-AAGGTACTATCAAATAAACGATAACTGATTTA 416
||||||||||| ||||| ||||||||| |||| |||||||||||||||||||||||||||
Sbjct 951 AGAATTACCACAGTTATACCATGTAGTAAAGGAACTATCAAATAAACGATAACTGATTTA 1010
Query 417 ATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATC 476
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1011 ATGAGCCATTCGCAGTTTCACTGTATAAATTGCTTATACTTAGACATGCATGGCTTAATC 1070
Query 477 TTTGAGACAAGCATATGACTACTGGCAG 504
||||||||||||||||||||||||||||
Sbjct 1071 TTTGAGACAAGCATATGACTACTGGCAG 1098
>seq2867
Length=527
Score = 360 bits (398), Expect = 6e-97
Identities = 379/489 (78%), Gaps = 11/489 (2%)
Strand=Plus/Minus
Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59
||| |||||||||||| | | || | | ||| ||| |||| ||||| | |||||||||
Sbjct 486 GTAATCATTCCAATTAGAGGGCCTCGGATGAGTCCTCTATCGTTATTTTTCGTCACTACC 427
Query 60 TCCCCGTGTCGGG-ATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCG 118
|| | | |||| ||||||||||||||| |||||||||||||||| |||||||||||||
Sbjct 426 TCGACCT-TCGGTCATTGGGTAATTTGCGTGCCTGCTGCCTTCCTTAGATGTGGTAGCCG 368
Query 119 TTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGG 178
||| | |||||||||||||||||||||||||| |||||||||||||||| | |||| |
Sbjct 367 TTTTTAAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTCAAAACCACTG 308
Query 179 TAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGG 238
| ||| |||| | || |||| ||||||||||||| | || ||| || ||||| |
Sbjct 307 TGGGCGTCTATGCCACAGTCGACAGTTGATAGGGCACACCTTCGAAGGATATGTCGCCAG 248
Query 239 CTCAAGGCCATGCGAT--TCGTTAAGTTATTATGAATCACCA--AGGAGCCCCGAAGGGC 294
|||||||| ||||||| | |||||||| || |||||| || | ||||| | |
Sbjct 247 CTCAAGGCTATGCGATCAGCCCAAAGTTATTCAGAGTCACCAAGAGTACAGCCGAA-GCC 189
Query 295 GTTGGTTTTTTATCTAATAAATACACCCCTTCCG--AAGTCGGGGTTTTTAGCATGTATT 352
||| | |||| |||||||||| | || || ||| | || | || ||| |||||||||
Sbjct 188 GTTTGGTTTTGATCTAATAAAAGCGCCTCTCCCGTAAGGTTGAGGCTTTGTGCATGTATT 129
Query 353 AGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGA 412
||||| ||||||||| | |||||||| ||| | ||||| | || | | |||
Sbjct 128 AGCTCCAGAATTACCGCAGTTATCCAAGTAACTTTTTTCTATCCAGTAGATTAGGTGTGA 69
Query 413 TTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTT 472
||||||||||||||||| ||||||| || || |||| ||||||||||||||||||||
Sbjct 68 TTTAATGAGCCATTCGCGGTTTCACCTTAGTGA-GGCTTGTACTTAGACATGCATGGCTT 10
Query 473 AATCTTTGA 481
|||||||||
Sbjct 9 AATCTTTGA 1
>seq865
Length=220
Score = 84.2 bits (92), Expect = 7e-14
Identities = 46/46 (100%), Gaps = 0/46 (0%)
Strand=Plus/Minus
Query 459 GACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 220 GACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 175
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1510339463168
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |