Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178185.1_202017-04- 22] 4,008 sequences; 12,879,491 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq3744 733 0.0 seq2867 360 6e-97 seq865 84.2 7e-14 >seq3744 Length=1142 Score = 733 bits (812), Expect = 0.0 Identities = 471/508 (93%), Gaps = 6/508 (1%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||||||||||||||||||||||| || | |||||||||| |||||||||||||||||| Sbjct 593 GTACTCATTCCAATTACAAGACCCGAATGGGCCCTGTATCGTTATTTATTGTCACTACCT 652 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 ||| | | |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 653 CCCTGAATTAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 712 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| Sbjct 713 TCTCAGGCTCCCTCTCCGGAATCGAACCCTTATTCCCCGTTACCCGTTGAAACCATGGTA 772 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 773 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCAGCA 832 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300 ||||||||||||||||| |||||||||||||||| ||| ||| ||||| | | ||| | Sbjct 833 CAAGGCCATGCGATTCGAAAAGTTATTATGAATCATCAAAGAG-TCCGAA-GACATTGAT 890 Query 301 TTTTTATCTAATAAATACACCCCTTCCGAA--GTCGGGGTTTTTAGCATGTATTAGCTCT 358 ||||||||||||||||||| | ||||| || |||| | |||| |||||||||||||||| Sbjct 891 TTTTTATCTAATAAATACATCTCTTCCAAAGGGTCGAGATTTTAAGCATGTATTAGCTCT 950 Query 359 AGAATTACCACGGTTAT-CCATGTAGT-AAGGTACTATCAAATAAACGATAACTGATTTA 416 ||||||||||| ||||| ||||||||| |||| ||||||||||||||||||||||||||| Sbjct 951 AGAATTACCACAGTTATACCATGTAGTAAAGGAACTATCAAATAAACGATAACTGATTTA 1010 Query 417 ATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATC 476 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 1011 ATGAGCCATTCGCAGTTTCACTGTATAAATTGCTTATACTTAGACATGCATGGCTTAATC 1070 Query 477 TTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||||| Sbjct 1071 TTTGAGACAAGCATATGACTACTGGCAG 1098 >seq2867 Length=527 Score = 360 bits (398), Expect = 6e-97 Identities = 379/489 (78%), Gaps = 11/489 (2%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 ||| |||||||||||| | | || | | ||| ||| |||| ||||| | ||||||||| Sbjct 486 GTAATCATTCCAATTAGAGGGCCTCGGATGAGTCCTCTATCGTTATTTTTCGTCACTACC 427 Query 60 TCCCCGTGTCGGG-ATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCG 118 || | | |||| ||||||||||||||| |||||||||||||||| ||||||||||||| Sbjct 426 TCGACCT-TCGGTCATTGGGTAATTTGCGTGCCTGCTGCCTTCCTTAGATGTGGTAGCCG 368 Query 119 TTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGG 178 ||| | |||||||||||||||||||||||||| |||||||||||||||| | |||| | Sbjct 367 TTTTTAAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTCAAAACCACTG 308 Query 179 TAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGG 238 | ||| |||| | || |||| ||||||||||||| | || ||| || ||||| | Sbjct 307 TGGGCGTCTATGCCACAGTCGACAGTTGATAGGGCACACCTTCGAAGGATATGTCGCCAG 248 Query 239 CTCAAGGCCATGCGAT--TCGTTAAGTTATTATGAATCACCA--AGGAGCCCCGAAGGGC 294 |||||||| ||||||| | |||||||| || |||||| || | ||||| | | Sbjct 247 CTCAAGGCTATGCGATCAGCCCAAAGTTATTCAGAGTCACCAAGAGTACAGCCGAA-GCC 189 Query 295 GTTGGTTTTTTATCTAATAAATACACCCCTTCCG--AAGTCGGGGTTTTTAGCATGTATT 352 ||| | |||| |||||||||| | || || ||| | || | || ||| ||||||||| Sbjct 188 GTTTGGTTTTGATCTAATAAAAGCGCCTCTCCCGTAAGGTTGAGGCTTTGTGCATGTATT 129 Query 353 AGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGA 412 ||||| ||||||||| | |||||||| ||| | ||||| | || | | ||| Sbjct 128 AGCTCCAGAATTACCGCAGTTATCCAAGTAACTTTTTTCTATCCAGTAGATTAGGTGTGA 69 Query 413 TTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTT 472 ||||||||||||||||| ||||||| || || |||| |||||||||||||||||||| Sbjct 68 TTTAATGAGCCATTCGCGGTTTCACCTTAGTGA-GGCTTGTACTTAGACATGCATGGCTT 10 Query 473 AATCTTTGA 481 ||||||||| Sbjct 9 AATCTTTGA 1 >seq865 Length=220 Score = 84.2 bits (92), Expect = 7e-14 Identities = 46/46 (100%), Gaps = 0/46 (0%) Strand=Plus/Minus Query 459 GACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 220 GACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 175 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510339463168