Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178185.1_202017-04-
22] 4,008 sequences; 12,879,491 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq109 136 3e-27
seq79 125 6e-24
seq3517 104 2e-17
>seq109
Length=17983
Score = 136 bits (150), Expect = 3e-27
Identities = 393/605 (65%), Gaps = 0/605 (0%)
Strand=Plus/Minus
Query 66320 CCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCG 66379
|||| | ||| ||||| ||| || |||||||| ||||| || || ||| | |||
Sbjct 12346 CCATTTTCTTCGACACGCTTCATGAAAAGATCAGGAATCCATAGAGCAGGGAACAAATCT 12287
Query 66380 CGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCG 66439
| ||| || ||||| | ||||| || || | | || | || ||||| || ||
Sbjct 12286 CTTGCACGAATTTCCTCTTTACCGTGGTTCTTCCTAATATCAATAAAATCAAATATATCA 12227
Query 66440 GCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCG 66499
|||||||||||||||||||| | ||| |||| || | ||| ||||| |||||
Sbjct 12226 GCATGCCATGGTTCCAGGTAAAGGGCAAACGCACCAGGTCTTTTATTACCACCCTGGTCA 12167
Query 66500 ACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCA 66559
|| || || || || ||||| ||||| | ||| || | | |||||||| | ||
Sbjct 12166 ACATAACGGGCAGTGTTATTGAAAACACGAATCATAGGAATTAAACCGTTAGAAGTACCG 12107
Query 66560 TTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCA 66619
|| || || | ||| || || || || || | || | || ||||||||||||
Sbjct 12106 TTTGTACCAGCAATGTAAGAACCAGTTGAACGAATGTTATGGATATGTAGACCAATACCA 12047
Query 66620 CCGGCCGTCTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGGAG 66679
|| || || || || || |||||| || || || | | || || || || |||
Sbjct 12046 CCAGCAGTTTTGGAAATCAAAGCACATTCCTTCAAGGTGTCGTAAATCCCCTCGATAGAG 11987
Query 66680 TCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAG 66739
|| |||| |||| | | | | || || | ||| ||||| || || |||| |
Sbjct 11986 TCCTCCTTCATGGCAACCAAGAAACAAGAGGACATTTGAGGTTTTGGAGTACCGGCATTG 11927
Query 66740 AAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATG 66799
|| | || || | ||||| ||||| || | ||||||| | || ||||| || |
Sbjct 11926 AACAACGTTGGAGAGGCGTGAGTAAAATATTTTAGAGACATCAAGTTATACGTTTCTAAA 11867
Query 66800 ACAGCATCAATGTTTTCGCCATGAATCCCGAGTGCACATCGCATCAGGAGGTATTGAGGC 66859
|||| || || | | || || || || ||||| || ||| | | | ||| ||
Sbjct 11866 GCAGCCTCGATATCTCTACCGTGGATGCCTAGTGCGACTCTCATAATTAAATGTTGTGGA 11807
Query 66860 CGTTCGACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACCA 66919
|||||| ||| || | ||||| | ||| || || ||||||| || || | ||||
Sbjct 11806 CGTTCGGCCACTTGACCGTTGATTCTTAGTAAATAAGAACGTTCCAAAGTTTTAAAACCA 11747
Query 66920 AAGTA 66924
|| ||
Sbjct 11746 AAATA 11742
>seq79
Length=27047
Score = 125 bits (138), Expect = 6e-24
Identities = 372/569 (65%), Gaps = 15/569 (3%)
Strand=Plus/Minus
Query 61066 TTCCCCATCGAGTATGAGGATATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGG 61125
||||| ||| |||| | || || |||| ||||| || |||||||| ||||||
Sbjct 1024 TTCCCTATCAAGTACCATGAAATCTGGCAAGCCTACAAGCGTGCCGAAGCTTCTTTCTGG 965
Query 61126 ACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACTGGGAGCGTTTATCGAGCGGT 61185
|| | || || | |||||||| || || || |||||||| | | || ||
Sbjct 964 ACCGCTGAAGAAATTGATTTGTCTAAGGATATCCATGACTGGAACAACAGAATGAACGA- 906
Query 61186 GAACAACA----TTTCATTAAACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGT 61241
|||| | | ||||||| || | || || || |||||||| |||||||| ||
Sbjct 905 GAACGAGAGATTTTTCATTTCCAGAGTTCTTGCCTTTTTCGCCGCTTCTGACGGTATTGT 846
Query 61242 CAATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTT 61301
||||| || || | ||| ||| | || || ||| | | ||||| ||||
Sbjct 845 TAATGAAAACTTGGTTGAAAACTTCTCCACCGAAGTCCAAATTCCAGAGGCAAAGAGTTT 786
Query 61302 CTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGA 61361
|||||| ||||| || || || ||| | ||||| || | ||| | | |||||
Sbjct 785 CTACGGTTTCCAAATCATGATTGAAAATATTCACTCTGAAACTTACTCCTTGTTGATCGA 726
Query 61362 TACGTACATCAGGGAGCGGGCGGAACGTGAACGATTGTTCAATGCCATCGAGACGATACC 61421
||| ||||||| ||| | ||| ||||| |||||||||||||| | || || ||
Sbjct 725 TACTTACATCAAGGACCCTAAAGAAAGTGAATTCTTGTTCAATGCCATTCACACCATCCC 666
Query 61422 GG----CGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGA-TCACCAGTACAACGGCT 61476
| |||||| ||| || || ||||| || | |||| ||| | ||| ||
Sbjct 665 AGAAATCGGTGA----GAAGGCCGAATGGGCTTTAAGATGGATTCAAGACGCTGACGCCT 610
Query 61477 ACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCG 61536
||||||||| || | | || ||||| | | || ||||| |||||| || ||
Sbjct 609 -TGTTTGGTGAAAGACTAGTTGCCTTTGCCGCCATTGAAGGTGTCTTTTTCTCCGGTTCC 551
Query 61537 TTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAAT 61596
|||||| | || || |||||||| || | || | ||||||||| | ||||| |||
Sbjct 550 TTTGCCTCCATTTTCTGGTTGAAAAAGAGAGGTATGATGCCCGGTTTAACCTTTTCCAAC 491
Query 61597 GAGTTGATATCACGCGACGAGGGCATGCA 61625
|| ||||| | | ||||| || ||||
Sbjct 490 GAATTGATCTGTAGAGACGAAGGTTTGCA 462
>seq3517
Length=75670
Score = 104 bits (114), Expect = 2e-17
Identities = 401/625 (64%), Gaps = 10/625 (2%)
Strand=Plus/Minus
Query 66320 CCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCG 66379
||||||| || ||||| ||| || |||||||| ||||| || || ||| | |||
Sbjct 68914 CCATCCTCTTGAACACGTTTCATGAAAAGATCAGGGATCCATAGAGCAGGGAACAAATCT 68855
Query 66380 CGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCG 66439
| ||| || || || | || || |||| | | |||| || || ||||| ||
Sbjct 68854 CTTGCACGAATTTCTTCCTTACCATGTGTTTTTCTGATATCGACAAAGTCGAAGATATCT 68795
Query 66440 GCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCG 66499
||||||||||| |||| | | | |||||| | || | ||| ||||| |||||
Sbjct 68794 GCATGCCATGGCTCCAAGAAAAGGGCGAAAGCACCAGGTCTCTTGTTACCACCCTGGTCC 68735
Query 66500 ACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCA 66559
|| || || || ||| ||||| ||||| | ||| || | | |||||| || | ||
Sbjct 68734 ACATAACGGGCAGTATTATTGAAAACACGAATCATAGGAATCAACCCGTTTGAAGTACCG 68675
Query 66560 TTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCA 66619
||||| || |||| || ||| | || || | || | || ||||||| ||||
Sbjct 68674 TTGGTACCAGCGATATAAGAACCTGTGGAACGGATGTTGTTGATATGAAGACCAACACCA 68615
Query 66620 CCGGCCGTCTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGGAG 66679
|| || || || || || |||||| || || || | || || || || |||
Sbjct 68614 CCTGCAGTTTTGGAAATCATAGCACATTCTTTCAAAGTATCATAAATACCTTCGATAGAG 68555
Query 66680 TCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAG 66739
||| |||| |||| | | | | |||||| | ||| || | || || | || |
Sbjct 68554 TCATCCTTCATGGCAATTAAGAAACATGAAGACATTTGAGGATGTGGCGTACCAGCGTTG 68495
Query 66740 AAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATG 66799
|| | || || | |||||| || ||||| ||||| |||| || |||| |
Sbjct 68494 AATAAAGTTGGGGAAGCGTGAGTGAAGTATCTTAACGACATCAAATTATAAGTCTTCAGC 68435
Query 66800 ACAGCATCAATGTTTTCGCCATGAATCCCGAGTG-CACATCGCATCAGGAGGTATTGAGG 66858
|||| || || | ||||| || || || | |||| ||||| | | | |||||
Sbjct 68434 ACAGATTCGATATCGCTACCATGGATACCTAGCGCCACA-CGCATTACCAAATGCTGAGG 68376
Query 66859 CCGTTCGACCA----GCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGA 66914
||||| ||| ||| || | || || ||||| || || ||||| |||||||
Sbjct 68375 ACGTTCTGCCACTTCACCGTTCAGTCTTA-GC---AAGTACGAACGCTCCAGTGTCTTGA 68320
Query 66915 TACCAAAGTACGAGTAATTGAAATC 66939
|| || |||| || | ||||||
Sbjct 68319 ATCCGAAATACGTATACTGGAAATC 68295
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397548579797120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |