Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178195.1_202017-04-
22] 2,577 sequences; 12,498,113 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq1894 136 3e-27
seq4 120 2e-22
seq3 116 3e-21
>seq1894
Length=102925
Score = 136 bits (150), Expect = 3e-27
Identities = 393/605 (65%), Gaps = 0/605 (0%)
Strand=Plus/Minus
Query 66320 CCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCG 66379
|||| | ||| ||||| ||| || |||||||| ||||| || || ||| | |||
Sbjct 35830 CCATTTTCTTCGACACGCTTCATGAAAAGATCAGGAATCCATAGAGCAGGGAACAAATCT 35771
Query 66380 CGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCG 66439
| ||| || ||||| | ||||| || || | | || | || ||||| || ||
Sbjct 35770 CTTGCACGAATTTCCTCTTTACCGTGGTTCTTCCTAATATCAATAAAATCAAATATATCA 35711
Query 66440 GCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCG 66499
|||||||||||||||||||| | ||| |||| || | ||| ||||| |||||
Sbjct 35710 GCATGCCATGGTTCCAGGTAAAGGGCAAACGCACCAGGTCTTTTATTACCACCCTGGTCA 35651
Query 66500 ACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCA 66559
|| || || || || ||||| ||||| | ||| || | | |||||||| | ||
Sbjct 35650 ACATAACGGGCAGTGTTATTGAAAACACGAATCATAGGAATTAAACCGTTAGAAGTACCG 35591
Query 66560 TTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCA 66619
|| || || | ||| || || || || || | || | || ||||||||||||
Sbjct 35590 TTTGTACCAGCAATGTAAGAACCAGTTGAACGAATGTTATGGATATGTAGACCAATACCA 35531
Query 66620 CCGGCCGTCTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGGAG 66679
|| || || || || || |||||| || || || | | || || || || |||
Sbjct 35530 CCAGCAGTTTTGGAAATCAAAGCACATTCCTTCAAGGTGTCGTAAATCCCCTCGATAGAG 35471
Query 66680 TCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAG 66739
|| |||| |||| | | | | || || | ||| ||||| || || |||| |
Sbjct 35470 TCCTCCTTCATGGCAACCAAGAAACAAGAGGACATTTGAGGTTTTGGAGTACCGGCATTG 35411
Query 66740 AAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATG 66799
|| | || || | ||||| ||||| || | ||||||| | || ||||| || |
Sbjct 35410 AACAACGTTGGAGAGGCGTGAGTAAAATATTTTAGAGACATCAAGTTATACGTTTCTAAA 35351
Query 66800 ACAGCATCAATGTTTTCGCCATGAATCCCGAGTGCACATCGCATCAGGAGGTATTGAGGC 66859
|||| || || | | || || || || ||||| || ||| | | | ||| ||
Sbjct 35350 GCAGCCTCGATATCTCTACCGTGGATGCCTAGTGCGACTCTCATAATTAAATGTTGTGGA 35291
Query 66860 CGTTCGACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACCA 66919
|||||| ||| || | ||||| | ||| || || ||||||| || || | ||||
Sbjct 35290 CGTTCGGCCACTTGACCGTTGATTCTTAGTAAATAAGAACGTTCCAAAGTTTTAAAACCA 35231
Query 66920 AAGTA 66924
|| ||
Sbjct 35230 AAATA 35226
>seq4
Length=304383
Score = 120 bits (132), Expect = 2e-22
Identities = 371/569 (65%), Gaps = 15/569 (3%)
Strand=Plus/Minus
Query 61066 TTCCCCATCGAGTATGAGGATATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGG 61125
||||| ||| |||| | || || |||| ||||| || |||||||| ||||||
Sbjct 62239 TTCCCTATCAAGTACCATGAAATCTGGCAAGCCTACAAGCGTGCCGAAGCTTCTTTCTGG 62180
Query 61126 ACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACTGGGAGCGTTTATCGAGCGGT 61185
|| | || || | |||||||| || || || |||||||| | | || ||
Sbjct 62179 ACCGCTGAAGAAATTGATTTGTCTAAGGATATCCATGACTGGAACAACAGAATGAACGA- 62121
Query 61186 GAACAACA----TTTCATTAAACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGT 61241
|||| | | ||||||| || | || || || |||||||| |||||||| ||
Sbjct 62120 GAACGAGAGATTTTTCATTTCCAGAGTTCTTGCCTTTTTCGCCGCTTCTGACGGTATTGT 62061
Query 61242 CAATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTT 61301
||||| || || | ||| ||| | || || ||| | | ||||| ||||
Sbjct 62060 TAATGAAAACTTGGTTGAAAACTTCTCCACCGAAGTCCAAATTCCAGAGGCAAAGAGTTT 62001
Query 61302 CTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGA 61361
|||||| ||||| || || || ||| | ||||| || | ||| | | |||||
Sbjct 62000 CTACGGTTTCCAAATCATGATTGAAAATATTCACTCTGAAACTTACTCCTTGTTGATCGA 61941
Query 61362 TACGTACATCAGGGAGCGGGCGGAACGTGAACGATTGTTCAATGCCATCGAGACGATACC 61421
||| ||||||| ||| | ||| ||||| |||||||||||||| | || || ||
Sbjct 61940 TACCTACATCAAGGACCCTAAAGAAAGTGAATTCTTGTTCAATGCCATTCACACCATCCC 61881
Query 61422 GG----CGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGA-TCACCAGTACAACGGCT 61476
| |||||| ||| || || ||||| || | |||| ||| | ||| ||
Sbjct 61880 AGAAATCGGTGA----GAAGGCCGAATGGGCTTTAAGATGGATTCAAGACGCTGACGCCT 61825
Query 61477 ACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCG 61536
||||||||| || | | || ||||| | || ||||| |||||| || ||
Sbjct 61824 -TGTTTGGTGAAAGACTAGTTGCCTTTGCCTCCATTGAAGGTGTCTTTTTCTCCGGTTCC 61766
Query 61537 TTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAAT 61596
|||||| | || || |||||||| || | || | ||||||||| | ||||| |||
Sbjct 61765 TTTGCCTCCATTTTCTGGTTGAAAAAGAGAGGTATGATGCCCGGTTTAACCTTTTCCAAC 61706
Query 61597 GAGTTGATATCACGCGACGAGGGCATGCA 61625
|| ||||| | | ||||| || ||||
Sbjct 61705 GAATTGATCTGTAGAGACGAAGGTTTGCA 61677
>seq3
Length=304868
Score = 116 bits (128), Expect = 3e-21
Identities = 415/644 (64%), Gaps = 10/644 (2%)
Strand=Plus/Plus
Query 66320 CCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCG 66379
||||||| || ||||| ||| || |||||||| ||||| || || ||| | |||
Sbjct 217249 CCATCCTCTTGAACACGTTTCATGAAAAGATCAGGGATCCATAGAGCAGGGAACAAATCT 217308
Query 66380 CGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCG 66439
| ||| || || || | || || |||| | | |||| || || ||||| ||
Sbjct 217309 CTTGCACGAATTTCTTCCTTACCATGTGTTTTTCTGATATCGACAAAGTCGAAGATATCT 217368
Query 66440 GCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCG 66499
||||||||||| |||| | | | |||||| | || | ||| ||||| |||||
Sbjct 217369 GCATGCCATGGCTCCAAGAAAAGGGCGAAAGCACCAGGTCTCTTGTTACCACCCTGGTCC 217428
Query 66500 ACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCA 66559
|| || || || ||| ||||| ||||| | ||| || | | |||||| || | ||
Sbjct 217429 ACATAACGGGCAGTATTATTGAAAACACGAATCATAGGAATCAACCCGTTTGAAGTACCG 217488
Query 66560 TTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCA 66619
||||| || |||| || ||| | || || | || | || ||||||| ||||
Sbjct 217489 TTGGTACCAGCGATATAAGAACCTGTGGAACGGATGTTGTTGATATGAAGACCAACACCA 217548
Query 66620 CCGGCCGTCTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGGAG 66679
|| || || || || || |||||| || || || | || || || || |||
Sbjct 217549 CCTGCAGTTTTGGAAATCATAGCACATTCTTTCAAAGTATCATAAATACCTTCGATAGAG 217608
Query 66680 TCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAG 66739
||| |||| |||| | | | | |||||| | ||| || | || || | || |
Sbjct 217609 TCATCCTTCATGGCAATTAAGAAACATGAAGACATTTGAGGATGTGGCGTACCAGCGTTG 217668
Query 66740 AAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATG 66799
|| | || || | |||||| || ||||| ||||| |||| || |||| |
Sbjct 217669 AATAAAGTTGGGGAAGCGTGAGTGAAGTATCTTAACGACATCAAATTATAAGTCTTCAGC 217728
Query 66800 ACAGCATCAATGTTTTCGCCATGAATCCCGAGTG-CACATCGCATCAGGAGGTATTGAGG 66858
|||| || || | ||||| || || || | |||| ||||| | | | |||||
Sbjct 217729 ACAGATTCGATATCGCTACCATGGATACCTAGCGCCACA-CGCATTACCAAATGCTGAGG 217787
Query 66859 CCGTTCGACCA----GCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGA 66914
||||| ||| ||| || | || || ||||| || || ||||| |||||||
Sbjct 217788 ACGTTCTGCCACTTCACCGTTCAGTCTTA-GC---AAGTACGAACGCTCCAGTGTCTTGA 217843
Query 66915 TACCAAAGTACGAGTAATTGAAATCGTTAGCATGCACGATGGCC 66958
|| || |||| || | |||||| || | | ||||||||||
Sbjct 217844 ATCCGAAATACGTATACTGGAAATCCCTATCGTACACGATGGCC 217887
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397555513507280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |