Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178225.1_202017-04-
21] 645 sequences; 11,761,021 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq105 782 0.0
seq376 138 4e-30
seq110 109 2e-21
>seq105
Length=1000
Score = 782 bits (866), Expect = 0.0
Identities = 502/541 (93%), Gaps = 9/541 (2%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
|||||| ||||| |||||||||||||||||||||| ||||||||||||| |||||||||
Sbjct 991 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGCCCCCCTTAGGACATCTGCGTTATC 932
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 931 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCGGATC 872
Query 127 GGCCCGCGAA--GGACCTT-AACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCAT 183
|||| |||| ||||||| || || |||| ||| |||| |||| ||||||||||
Sbjct 871 AGCCC-CGAATGGGACCTTGAATGCTAGAACGTGGAAAATGAATTCCAGCTCCGCTTCAT 813
Query 184 TGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCAC 243
||| |||||||| |||| |||| ||||||||||||||||| |||||||| ||||||||
Sbjct 812 TGAATAAGTAAAGAAACTATAAAGGTAGTGGTATTTCACTGGCGCCGAA---GCTCCCAC 756
Query 244 TTATTCTACACCTCTCAA-GTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGT 302
|||||||||||| ||| | ||| ||||||| ||| |||||||||||||||||||||||
Sbjct 755 TTATTCTACACC-CTCTATGTCTCTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGT 697
Query 303 CTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTA 362
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 696 CTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTA 637
Query 363 GATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGG 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 636 GATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGG 577
Query 423 CATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAAT 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 576 CATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAAT 517
Query 483 TTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCT 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 516 TTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCT 457
Query 543 G 543
|
Sbjct 456 G 456
>seq376
Length=220294
Score = 138 bits (152), Expect = 4e-30
Identities = 87/94 (93%), Gaps = 0/94 (0%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
|||||| ||||| |||||||||||||||||||||| ||||||||||||| |||||||||
Sbjct 220285 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGCCCCCCTTAGGACATCTGCGTTATC 220226
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCC 100
||||||||||||| ||||||||||||||||| ||
Sbjct 220225 GTTTAACAGATGTACCGCCCCAGCCAAACTCTCC 220192
>seq110
Length=933
Score = 109 bits (120), Expect = 2e-21
Identities = 68/73 (93%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
|||||| ||||| |||||||||||||||||||||| ||||||||||||| |||||||||
Sbjct 861 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGCCCCCCTTAGGACATCTGCGTTATC 920
Query 67 GTTTAACAGATGT 79
|||||||||||||
Sbjct 921 GTTTAACAGATGT 933
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1635189452960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |