Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178265.1_202017-04- 22] 2,475 sequences; 12,565,824 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq208 769 0.0 seq2118 141 3e-31 seq1200 131 5e-28 >seq208 Length=630 Score = 769 bits (852), Expect = 0.0 Identities = 494/532 (93%), Gaps = 9/532 (2%) Strand=Plus/Minus Query 16 TACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGGTTTAACAG 75 ||| |||||||||||||||||||||| ||||||||||||| ||||||||| ||||||||| Sbjct 630 TACTGGAGATTTCTGTTCTCCATGAGCCCCCCTTAGGACATCTGCGTTATCGTTTAACAG 571 Query 76 ATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATCGGCCCGCGA 135 |||||||||||||||||||||||||||||||||||||| |||||||||||| |||| ||| Sbjct 570 ATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCGGATCAGCCC-CGA 512 Query 136 A--GGACCTT-AACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGATTAAGT 192 | ||||||| || || |||| ||| |||| |||| ||||||||||||| ||||| Sbjct 511 ATGGGACCTTGAATGCTAGAACGTGGAAAATGAATTCCAGCTCCGCTTCATTGAATAAGT 452 Query 193 aaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTATTCTAC 252 ||| |||| |||| ||||||||||||||||| |||||||| ||||||||||||||||| Sbjct 451 AAAGAAACTATAAAGGTAGTGGTATTTCACTGGCGCCGAA---GCTCCCACTTATTCTAC 395 Query 253 ACCTCTCAA-GTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCC 311 ||| ||| | ||| ||||||| ||| |||||||||||||||||||||||||||||||| Sbjct 394 ACC-CTCTATGTCTCTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTCTTCTTTCC 336 Query 312 CCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGAC 371 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 335 CCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGAC 276 Query 372 AGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCT 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 275 AGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCT 216 Query 432 ACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACT 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 215 ACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACT 156 Query 492 TTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 155 TTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 104 >seq2118 Length=794 Score = 141 bits (156), Expect = 3e-31 Identities = 86/91 (95%), Gaps = 0/91 (0%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| ||||| |||||||||||||||||||||| ||||||||||||| ||||||||| Sbjct 91 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGCCCCCCTTAGGACATCTGCGTTATC 32 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTC 97 ||||||||||||||||||||||||||||||| Sbjct 31 GTTTAACAGATGTGCCGCCCCAGCCAAACTC 1 >seq1200 Length=195268 Score = 131 bits (144), Expect = 5e-28 Identities = 80/85 (94%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 16 TACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGGTTTAACAG 75 ||| |||||||||||||||||||||| ||||||||||||| ||||||||| ||||||||| Sbjct 195268 TACTGGAGATTTCTGTTCTCCATGAGCCCCCCTTAGGACATCTGCGTTATCGTTTAACAG 195209 Query 76 ATGTGCCGCCCCAGCCAAACTCCCC 100 |||||||||||||||||||||| || Sbjct 195208 ATGTGCCGCCCCAGCCAAACTCTCC 195184 Score = 84.2 bits (92), Expect = 7e-14 Identities = 51/54 (94%), Gaps = 0/54 (0%) Strand=Plus/Minus Query 47 CTTAGGACACCTGCGTTATGGTTTAACAGATGTGCCGCCCCAGCCAAACTCCCC 100 ||||||||| ||||||||| ||||||||||||||||||||||||||||||| || Sbjct 195086 CTTAGGACATCTGCGTTATCGTTTAACAGATGTGCCGCCCCAGCCAAACTCTCC 195033 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635159528800