Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178305.1_202017-04- 22] 3,318 sequences; 12,557,627 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq737 710 0.0 seq1437 152 2e-34 seq1163 86.0 2e-14 >seq737 Length=506 Score = 710 bits (786), Expect = 0.0 Identities = 458/494 (93%), Gaps = 9/494 (2%) Strand=Plus/Minus Query 54 CACCTGCGTTATGGTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113 || ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 506 CATCTGCGTTATCGTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 447 Query 114 ATCAACCCGGATCGGCCCGCGAA--GGACCTT-AACGCCAGAAAATGGTCGGTGAAGACC 170 |||||||||||| |||| |||| ||||||| || || |||| ||| |||| || Sbjct 446 TTCAACCCGGATCAGCCC-CGAATGGGACCTTGAATGCTAGAACGTGGAAAATGAATTCC 388 Query 171 AGTTCCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCG 230 || ||||||||||||| |||||||| |||| |||| ||||||||||||||||| |||||| Sbjct 387 AGCTCCGCTTCATTGAATAAGTAAAGAAACTATAAAGGTAGTGGTATTTCACTGGCGCCG 328 Query 231 AAACGGCTCCCACTTATTCTACACCTCTCAA-GTCATTTCACAAAGTCGGACTAGAGTCA 289 || |||||||||||||||||||| ||| | ||| ||||||| ||| |||||||||| Sbjct 327 AA---GCTCCCACTTATTCTACACC-CTCTATGTCTCTTCACAATGTCAAACTAGAGTCA 272 Query 290 AGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTT 349 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 271 AGCTCAACAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTT 212 Query 350 TCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAA 409 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 211 TCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAA 152 Query 410 TTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCG 469 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 151 TTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCG 92 Query 470 CGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTC 529 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 91 CGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTC 32 Query 530 AACATCACTTTCTG 543 |||||||||||||| Sbjct 31 AACATCACTTTCTG 18 >seq1437 Length=105 Score = 152 bits (168), Expect = 2e-34 Identities = 93/99 (94%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| ||||| |||||||||||||||||||||| |||||||||| || ||||||||| Sbjct 99 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGCCCCCCTTAGGCCATCTGCGTTATC 40 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTG 105 ||||||||||||||||||||||||||||||||||||||| Sbjct 39 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTG 1 >seq1163 Length=25514 Score = 86.0 bits (94), Expect = 2e-14 Identities = 52/55 (95%), Gaps = 0/55 (0%) Strand=Plus/Plus Query 46 CCTTAGGACACCTGCGTTATGGTTTAACAGATGTGCCGCCCCAGCCAAACTCCCC 100 |||||||||| ||||||||| ||||||||||||||||||||||||||||||| || Sbjct 1 CCTTAGGACATCTGCGTTATCGTTTAACAGATGTGCCGCCCCAGCCAAACTCTCC 55 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635145744064