Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178305.1_202017-04- 22] 3,318 sequences; 12,557,627 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq1179 196 8e-48 >seq1179 Length=488 Score = 196 bits (216), Expect = 8e-48 Identities = 202/258 (78%), Gaps = 16/258 (6%) Strand=Plus/Plus Query 36 TTTTGCGGCTGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAA 95 |||||||||||||||| |||||| |||||||||||||||||| ||||||||||||||||| Sbjct 1 TTTTGCGGCTGTCTGATCAGGCATTGCCGCGAAGCTACCATCCGCTGGATTATGGCTGAA 60 Query 96 CGCCTCTAAGTCAGAATCCATGCCAGAACGGGGTGA-TTCTCTCCT--GCACATCGTAGT 152 ||||||||||||||||||||||| |||||| ||||| |||| | || |||| ||| Sbjct 61 CGCCTCTAAGTCAGAATCCATGCTAGAACGCGGTGATTTCTTTGCTCCACACAATATAGA 120 Query 153 CGGATACGAAT-AGGCTT--------CGGCCCCGAACCTTAGCAGGCCGGCAACGG-GCG 202 |||||||||| |||| | || | | ||||| |||||||| ||||||| || Sbjct 121 TGGATACGAATAAGGCGTCCTTGTGGCGTCGCTGAACCATAGCAGGCTAGCAACGGTGCA 180 Query 203 TCCCGCGGAA--GCGCGGGGCGCTCAGCTGGCGGATTGCAATTTCACCATGCGCAGGGAT 260 |||||| || ||| ||| ||||||| |||||||| ||| |||| ||||| Sbjct 181 CTTGGCGGAAAGGCCTTGGGTGCT-TGCTGGCGAATTGCAATGTCATTTTGCGTGGGGAT 239 Query 261 AAATCCTTTGCAGACGAC 278 ||||| |||| | ||||| Sbjct 240 AAATCATTTGTATACGAC 257 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819173668352