Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178305.1_202017-04- 22] 3,318 sequences; 12,557,627 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq1739 625 9e-177 seq706 187 8e-45 >seq1739 Length=470 Score = 625 bits (692), Expect = 9e-177 Identities = 396/423 (94%), Gaps = 6/423 (1%) Strand=Plus/Minus Query 86 CGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGA 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 470 CGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGA 411 Query 146 ACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTT 205 ||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 410 ACCCTTATTCCCCGTTACCCGTTGAAACCATGGTAGGCCACTATCCTACCATCGAAAGTT 351 Query 206 GATAGGGCAGAAATTTGAATGAACCATCGCCGGCTCAAGGCCATGCGATTCGTTAAGTTA 265 ||||||||||||||||||||||||||||||| || ||||||||||||||||| |||||| Sbjct 350 GATAGGGCAGAAATTTGAATGAACCATCGCCAGCACAAGGCCATGCGATTCGAAAAGTTA 291 Query 266 TTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGTTTTTTATCTAATAAATACACCCCTT 325 |||||||||| ||| ||| ||||| | | ||| |||||||||||||||||||| | ||| Sbjct 290 TTATGAATCATCAAAGAG-TCCGAA-GACATTGATTTTTTATCTAATAAATACATCTCTT 233 Query 326 CCGAA--GTCGGGGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTAT-CCATGTA 382 || || |||| | |||| ||||||||||||||||||||||||||| ||||| ||||||| Sbjct 232 CCAAAGGGTCGAGATTTTAAGCATGTATTAGCTCTAGAATTACCACAGTTATACCATGTA 173 Query 383 GT-AAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTA 441 || |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 172 GTAAAGGAACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTA 113 Query 442 TAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGG 501 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 112 TAAATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGG 53 Query 502 CAG 504 ||| Sbjct 52 CAG 50 >seq706 Length=207 Score = 187 bits (206), Expect = 8e-45 Identities = 118/128 (92%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||||||||||||||||||||||| || | |||||||||| |||||||||||||||||| Sbjct 128 GTACTCATTCCAATTACAAGACCCGAATGGGCCCTGTATCGTTATTTATTGTCACTACCT 69 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 ||| | | |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 68 CCCTGAATTAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 9 Query 121 TCTCAGGC 128 |||||||| Sbjct 8 TCTCAGGC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510349884928