Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178315.1_202017-04- 21] 2,667 sequences; 12,341,154 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq404 185 1e-44 seq1370 150 3e-34 seq1055 111 3e-22 seq1341 105 1e-20 >seq404 Length=284 Score = 185 bits (204), Expect = 1e-44 Identities = 111/117 (95%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 |||||||| |||||||||||||||||||||||| |||||| ||||||||||||||||||| Sbjct 242 CTATTTAGTAGGTTAAGGTCTCGTTCGTTATCGCAATTAAGCAGACAAATCACTCCACCA 183 Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||||||||||||||||||||||||| | ||||||||||||||| |||||||||| Sbjct 182 ACTAAGAACGGCCATGCACCACCACCCACAAAATCAAGAAAGAGCTCTCAATCTGTC 126 >seq1370 Length=441 Score = 150 bits (166), Expect = 3e-34 Identities = 91/96 (95%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 345 ACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACGTCTAAGGGCATCACAGA 404 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCC 97 |||||||||||||||||||||||| |||| ||| || Sbjct 405 CCTGTTATTGCCTCAAACTTCCATCGGCTTGAAACC 440 >seq1055 Length=109 Score = 111 bits (122), Expect = 3e-22 Identities = 67/71 (94%), Gaps = 0/71 (0%) Strand=Plus/Plus Query 45 TCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTC 104 ||||||||||||||||||||||||||||||||||||||||| |||| ||| || |||||| Sbjct 1 TCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCATCGGCTTGAAACCGATAGTC 60 Query 105 CCTCTAAGAAG 115 ||||||||||| Sbjct 61 CCTCTAAGAAG 71 >seq1341 Length=109 Score = 105 bits (116), Expect = 1e-20 Identities = 66/71 (93%), Gaps = 0/71 (0%) Strand=Plus/Plus Query 45 TCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTC 104 ||||||||||||||||||||||||||||||||||||||||| |||| ||| || ||||| Sbjct 1 TCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCATCGGCTTGAAACCGCTAGTC 60 Query 105 CCTCTAAGAAG 115 ||||||||||| Sbjct 61 CCTCTAAGAAG 71 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796779413427