Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178355.1_202017-04- 21] 1,182 sequences; 11,760,436 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq14 140 3e-28 seq1 120 2e-22 seq1105 116 3e-21 >seq14 Length=158423 Score = 140 bits (154), Expect = 3e-28 Identities = 394/605 (65%), Gaps = 0/605 (0%) Strand=Plus/Plus Query 66320 CCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCG 66379 |||| | ||| ||||| ||| || |||||||| ||||| || || ||| | ||| Sbjct 63359 CCATTTTCTTCGACACGCTTCATGAAAAGATCAGGAATCCATAGAGCAGGGAACAAATCT 63418 Query 66380 CGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCG 66439 | ||| || ||||| | ||||| || || | | || | || |||||||| || Sbjct 63419 CTTGCACGAATTTCCTCTTTACCGTGGTTCTTCCTAATATCAATAAAATCAAAGATATCA 63478 Query 66440 GCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCG 66499 |||||||||||||||||||| | ||| |||| || | ||| ||||| ||||| Sbjct 63479 GCATGCCATGGTTCCAGGTAAAGGGCAAACGCACCAGGTCTTTTATTACCACCCTGGTCA 63538 Query 66500 ACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCA 66559 || || || ||| || ||||| ||||| | ||| || | | |||||||| | || Sbjct 63539 ACATAACGGGCGGTGTTATTGAAAACACGAATCATAGGAATTAAACCGTTAGAAGTACCG 63598 Query 66560 TTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCA 66619 || || || | ||| || || || || || | || | || |||||||||||| Sbjct 63599 TTTGTACCAGCAATGTAAGAACCAGTTGAACGAATGTTATGGATATGTAGACCAATACCA 63658 Query 66620 CCGGCCGTCTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGGAG 66679 || || || || || || |||||| || || || | | || || || || ||| Sbjct 63659 CCAGCAGTTTTGGAAATCAAAGCACATTCCTTCAAGGTGTCGTAAATCCCCTCGATAGAG 63718 Query 66680 TCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAG 66739 || |||| |||| | | | | || || | ||| ||||| || || |||| | Sbjct 63719 TCCTCCTTCATGGCAACCAAGAAACAAGAGGACATTTGAGGTTTTGGAGTACCGGCATTG 63778 Query 66740 AAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATG 66799 || | || || | ||||| ||||| || | ||||||| | || ||||| || | Sbjct 63779 AACAACGTTGGAGAGGCGTGAGTAAAATATTTTAGAGACATCAAGTTATACGTTTCTAAA 63838 Query 66800 ACAGCATCAATGTTTTCGCCATGAATCCCGAGTGCACATCGCATCAGGAGGTATTGAGGC 66859 |||| || || | | || || || || ||||| || ||| | | | ||| || Sbjct 63839 GCAGCCTCGATATCTCTACCGTGGATGCCTAGTGCGACTCTCATAATTAAATGTTGTGGA 63898 Query 66860 CGTTCGACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACCA 66919 |||||| | | || | ||||| | ||| || || ||||||| || || | |||| Sbjct 63899 CGTTCGGCGACTTGACCGTTGATTCTTAGTAAATAAGAACGTTCCAAAGTTTTAAAACCA 63958 Query 66920 AAGTA 66924 || || Sbjct 63959 AAATA 63963 >seq1 Length=488485 Score = 120 bits (132), Expect = 2e-22 Identities = 371/569 (65%), Gaps = 15/569 (3%) Strand=Plus/Plus Query 61066 TTCCCCATCGAGTATGAGGATATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGG 61125 ||||| ||| |||| | || || |||| ||||| || |||||||| |||||| Sbjct 189180 TTCCCTATCAAGTACCATGAAATCTGGCAAGCCTACAAGCGTGCCGAAGCTTCTTTCTGG 189239 Query 61126 ACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACTGGGAGCGTTTATCGAGCGGT 61185 || | || || | |||||||| || || || |||||||| | | || || Sbjct 189240 ACCGCTGAAGAAATTGATTTGTCTAAGGATATCCATGACTGGAACAACAGAATGAACGA- 189298 Query 61186 GAACAACA----TTTCATTAAACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGT 61241 |||| | | ||||||| || | || || || |||||||| |||||||| || Sbjct 189299 GAACGAGAGATTTTTCATTTCCAGAGTTCTTGCCTTTTTCGCCGCTTCTGACGGTATTGT 189358 Query 61242 CAATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTT 61301 ||||| || || | ||| ||| | || || ||| | | ||||| |||| Sbjct 189359 TAATGAAAACTTGGTTGAAAACTTCTCCACCGAAGTCCAAATTCCAGAGGCAAAGAGTTT 189418 Query 61302 CTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGA 61361 |||||| ||||| || || || ||| | ||||| || | ||| | | ||||| Sbjct 189419 CTACGGTTTCCAAATCATGATTGAAAATATTCACTCTGAAACTTACTCCTTGTTGATCGA 189478 Query 61362 TACGTACATCAGGGAGCGGGCGGAACGTGAACGATTGTTCAATGCCATCGAGACGATACC 61421 ||| ||||||| ||| | ||| ||||| |||||||||||||| | || || || Sbjct 189479 TACTTACATCAAGGACCCTAAAGAAAGTGAATTCTTGTTCAATGCCATTCACACCATCCC 189538 Query 61422 GG----CGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGA-TCACCAGTACAACGGCT 61476 | |||||| ||| || || ||||| || | |||| ||| | ||| || Sbjct 189539 AGAAATCGGTGA----GAAGGCCGAATGGGCTTTAAGATGGATTCAAGACGCTGACGCCT 189594 Query 61477 ACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCG 61536 ||||||||| || | | || ||||| | || ||||| |||||| || || Sbjct 189595 -TGTTTGGTGAAAGACTAGTTGCCTTTGCCTCCATTGAAGGTGTCTTTTTCTCCGGTTCC 189653 Query 61537 TTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAAT 61596 |||||| | || || |||||||| || | || | ||||||||| | ||||| ||| Sbjct 189654 TTTGCCTCCATTTTCTGGTTGAAAAAGAGAGGTATGATGCCCGGTTTAACCTTTTCCAAC 189713 Query 61597 GAGTTGATATCACGCGACGAGGGCATGCA 61625 || ||||| | | ||||| || |||| Sbjct 189714 GAATTGATCTGTAGAGACGAAGGTTTGCA 189742 >seq1105 Length=372709 Score = 116 bits (128), Expect = 3e-21 Identities = 415/644 (64%), Gaps = 10/644 (2%) Strand=Plus/Minus Query 66320 CCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCG 66379 ||||||| || ||||| ||| || |||||||| ||||| || || ||| | ||| Sbjct 152293 CCATCCTCTTGAACACGTTTCATGAAAAGATCAGGGATCCATAGAGCAGGGAACAAATCT 152234 Query 66380 CGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCG 66439 | ||| || || || | || || |||| | | |||| || || ||||| || Sbjct 152233 CTTGCACGAATTTCTTCCTTACCATGTGTTTTTCTGATATCGACAAAGTCGAAGATATCT 152174 Query 66440 GCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCG 66499 ||||||||||| |||| | | | |||||| | || | ||| ||||| ||||| Sbjct 152173 GCATGCCATGGCTCCAAGAAAAGGGCGAAAGCACCAGGTCTCTTGTTACCACCCTGGTCC 152114 Query 66500 ACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCA 66559 || || || || ||| ||||| ||||| | ||| || | | |||||| || | || Sbjct 152113 ACATAACGGGCAGTATTATTGAAAACACGAATCATAGGAATCAACCCGTTTGAAGTACCG 152054 Query 66560 TTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCA 66619 ||||| || |||| || ||| | || || | || | || ||||||| |||| Sbjct 152053 TTGGTACCAGCGATATAAGAACCTGTGGAACGGATGTTGTTGATATGAAGACCAACACCA 151994 Query 66620 CCGGCCGTCTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGGAG 66679 || || || || || || |||||| || || || | || || || || ||| Sbjct 151993 CCTGCAGTTTTGGAAATCATAGCACATTCTTTCAAAGTATCATAAATACCTTCGATAGAG 151934 Query 66680 TCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAG 66739 ||| |||| |||| | | | | |||||| | ||| || | || || | || | Sbjct 151933 TCATCCTTCATGGCAATTAAGAAACATGAAGACATTTGAGGATGTGGCGTACCAGCGTTG 151874 Query 66740 AAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATG 66799 || | || || | |||||| || ||||| ||||| |||| || |||| | Sbjct 151873 AATAAAGTTGGGGAAGCGTGAGTGAAGTATCTTAACGACATCAAATTATAAGTCTTCAGC 151814 Query 66800 ACAGCATCAATGTTTTCGCCATGAATCCCGAGTG-CACATCGCATCAGGAGGTATTGAGG 66858 |||| || || | ||||| || || || | |||| ||||| | | | ||||| Sbjct 151813 ACAGATTCGATATCGCTACCATGGATACCTAGCGCCACA-CGCATTACCAAATGCTGAGG 151755 Query 66859 CCGTTCGACCA----GCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGA 66914 ||||| ||| ||| || | || || ||||| || || ||||| ||||||| Sbjct 151754 ACGTTCTGCCACTTCACCGTTCAGTCTTA-GC---AAGTACGAACGCTCCAGTGTCTTGA 151699 Query 66915 TACCAAAGTACGAGTAATTGAAATCGTTAGCATGCACGATGGCC 66958 || || |||| || | |||||| || | | |||||||||| Sbjct 151698 ATCCGAAATACGTATACTGGAAATCCCTATCGTACACGATGGCC 151655 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397562272784480