Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178365.1_202017-04-
22] 6,295 sequences; 12,671,704 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq4895 379 4e-103
seq5005 174 3e-41
seq3545 150 3e-34
>seq4895
Length=560
Score = 379 bits (420), Expect = 4e-103
Identities = 270/305 (89%), Gaps = 6/305 (2%)
Strand=Plus/Plus
Query 15 GGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTT 74
|||||||||||||||| | || | |||| ||| | | || || |||||||||
Sbjct 137 GGGCCTTTCCTTCTGGCTAACCTTGAGTCCTTG--TGGCTCTT--GGCGAACCAGGACTT 192
Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCT-TTGCTCGAATACATTAGCATGGA 133
|||||||||||||||||||||||||||||||||| | ||||||||||| |||||||||||
Sbjct 193 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCGTATTGCTCGAATATATTAGCATGGA 252
Query 134 ATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAA 193
||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||
Sbjct 253 ATAATAGAATAGGACGTTTGGTTCTATTTTGTTGGTTTCTAGGACCATCGTAATGATTAA 312
Query 194 TAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGA 253
|||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 313 TAGGGACGGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGA 372
Query 254 AGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTT 313
|||||||||||||||||||| || ||||||| |||||||||||||| |||||||||||
Sbjct 373 AGACTAACTACTGCGAAAGCATTTGCCAAGGACGTTTTCATTAATCA-AGAACGAAAGTT 431
Query 314 AGGGG 318
|||||
Sbjct 432 AGGGG 436
>seq5005
Length=629
Score = 174 bits (192), Expect = 3e-41
Identities = 210/279 (75%), Gaps = 9/279 (3%)
Strand=Plus/Plus
Query 40 TGCCCTTCACTGGGTG-TGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTT 98
||||||| |||| ||| ||| || || | | |||||| |||||||||||||||||||
Sbjct 161 TGCCCTTAACTGAGTGCTGCACTCGA-CCGGAATTTTTACCTTGAAAAAATTAGAGTGTT 219
Query 99 CAAAGCAGGCCTT----TGCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGCGG 154
|||||||| ||| || ||||| ||||||||||||| |||| || | ||
Sbjct 220 CAAAGCAGACCTGATTATGTCTGAATATTCGTGCATGGAATAATAAAATAAGAACTT-GG 278
Query 155 TTCTATTTTGTTGGTTTCTAGGAC-CGCCGTAATGATTAATAGGGATAGTCGGGGGTGTC 213
||||||||| ||||||| | || || |||||||||| ||||| || |||||| ||
Sbjct 279 TTCTATTTTATTGGTTTTCGGAACTCGAGTTAATGATTAAGAGGGACAGACGGGGGCATC 338
Query 214 AGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGC 273
||| || || ||||||||||||||||||| |||||| | |||||||||||
Sbjct 339 CGTACTCTGCCGTTAGAGGTGAAATTCTTGGATCGGCGGAAGACGCGCAACTGCGAAAGC 398
Query 274 GTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGT 312
|| ||||| |||||||| ||||||| ||||||||||
Sbjct 399 ATTTGCCAAGAATGTTTTCTTTAATCA-AGAACGAAAGT 436
>seq3545
Length=195
Score = 150 bits (166), Expect = 3e-34
Identities = 115/135 (85%), Gaps = 1/135 (1%)
Strand=Plus/Plus
Query 184 TAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTG 243
|||||||||||||||| ||||||||| | |||||||| | |||||||||||||||||
Sbjct 1 TAATGATTAATAGGGACAGTCGGGGGCATTTGTATTCAAACGACAGAGGTGAAATTCTTG 60
Query 244 GATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTG 303
|| |||||||| ||||||||||||||| || ||||| |||||||||||||||| |
Sbjct 61 GACCGTTTGAAGACAAACTACTGCGAAAGCATTTGCCAAGAATGTTTTCATTAATCA-AG 119
Query 304 AACGAAAGTTAGGGG 318
|||||||||||| ||
Sbjct 120 AACGAAAGTTAGAGG 134
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 915142388160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |