Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178365.1_202017-04- 22] 6,295 sequences; 12,671,704 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq4895 379 4e-103 seq5005 174 3e-41 seq3545 150 3e-34 >seq4895 Length=560 Score = 379 bits (420), Expect = 4e-103 Identities = 270/305 (89%), Gaps = 6/305 (2%) Strand=Plus/Plus Query 15 GGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTT 74 |||||||||||||||| | || | |||| ||| | | || || ||||||||| Sbjct 137 GGGCCTTTCCTTCTGGCTAACCTTGAGTCCTTG--TGGCTCTT--GGCGAACCAGGACTT 192 Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCT-TTGCTCGAATACATTAGCATGGA 133 |||||||||||||||||||||||||||||||||| | ||||||||||| ||||||||||| Sbjct 193 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCGTATTGCTCGAATATATTAGCATGGA 252 Query 134 ATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAA 193 ||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||| Sbjct 253 ATAATAGAATAGGACGTTTGGTTCTATTTTGTTGGTTTCTAGGACCATCGTAATGATTAA 312 Query 194 TAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGA 253 |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 313 TAGGGACGGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGA 372 Query 254 AGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTT 313 |||||||||||||||||||| || ||||||| |||||||||||||| ||||||||||| Sbjct 373 AGACTAACTACTGCGAAAGCATTTGCCAAGGACGTTTTCATTAATCA-AGAACGAAAGTT 431 Query 314 AGGGG 318 ||||| Sbjct 432 AGGGG 436 >seq5005 Length=629 Score = 174 bits (192), Expect = 3e-41 Identities = 210/279 (75%), Gaps = 9/279 (3%) Strand=Plus/Plus Query 40 TGCCCTTCACTGGGTG-TGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTT 98 ||||||| |||| ||| ||| || || | | |||||| ||||||||||||||||||| Sbjct 161 TGCCCTTAACTGAGTGCTGCACTCGA-CCGGAATTTTTACCTTGAAAAAATTAGAGTGTT 219 Query 99 CAAAGCAGGCCTT----TGCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGCGG 154 |||||||| ||| || ||||| ||||||||||||| |||| || | || Sbjct 220 CAAAGCAGACCTGATTATGTCTGAATATTCGTGCATGGAATAATAAAATAAGAACTT-GG 278 Query 155 TTCTATTTTGTTGGTTTCTAGGAC-CGCCGTAATGATTAATAGGGATAGTCGGGGGTGTC 213 ||||||||| ||||||| | || || |||||||||| ||||| || |||||| || Sbjct 279 TTCTATTTTATTGGTTTTCGGAACTCGAGTTAATGATTAAGAGGGACAGACGGGGGCATC 338 Query 214 AGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGC 273 ||| || || ||||||||||||||||||| |||||| | ||||||||||| Sbjct 339 CGTACTCTGCCGTTAGAGGTGAAATTCTTGGATCGGCGGAAGACGCGCAACTGCGAAAGC 398 Query 274 GTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGT 312 || ||||| |||||||| ||||||| |||||||||| Sbjct 399 ATTTGCCAAGAATGTTTTCTTTAATCA-AGAACGAAAGT 436 >seq3545 Length=195 Score = 150 bits (166), Expect = 3e-34 Identities = 115/135 (85%), Gaps = 1/135 (1%) Strand=Plus/Plus Query 184 TAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTG 243 |||||||||||||||| ||||||||| | |||||||| | ||||||||||||||||| Sbjct 1 TAATGATTAATAGGGACAGTCGGGGGCATTTGTATTCAAACGACAGAGGTGAAATTCTTG 60 Query 244 GATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTG 303 || |||||||| ||||||||||||||| || ||||| |||||||||||||||| | Sbjct 61 GACCGTTTGAAGACAAACTACTGCGAAAGCATTTGCCAAGAATGTTTTCATTAATCA-AG 119 Query 304 AACGAAAGTTAGGGG 318 |||||||||||| || Sbjct 120 AACGAAAGTTAGAGG 134 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915142388160