Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178365.1_202017-04- 22] 6,295 sequences; 12,671,704 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq4419 396 5e-108 seq4711 304 2e-80 seq4079 277 3e-72 seq4770 165 1e-38 >seq4419 Length=351 Score = 396 bits (438), Expect = 5e-108 Identities = 225/229 (98%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 67 TCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTG 126 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 TCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTG 60 Query 127 CTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGC 186 |||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| Sbjct 61 CTTCGGTATGATAGGAAGAGCCGACATCGAAGAATCAAAAAGCAATGTCGCTATGAACGC 120 Query 187 TTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATT 246 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 TTGACTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATT 180 Query 247 TCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 181 CCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 229 >seq4711 Length=467 Score = 304 bits (336), Expect = 2e-80 Identities = 204/228 (89%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 67 TCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTG 126 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 1 TCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTGGTGAATTCTG 60 Query 127 CTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGC 186 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 CTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGC 120 Query 187 TTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATT 246 ||||||||||||||||||||||||||||||||||||||||| ||||||| || | ||| Sbjct 121 TTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTTGCTTAAAACC 180 Query 247 TCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCA 294 | | | |||||||||||||||| | ||||| ||| |||||||| Sbjct 181 CCTAAAATCAAAAGGATCGATAGGCCCCGCTTTCGCGGTCTGTATTCA 228 >seq4079 Length=261 Score = 277 bits (306), Expect = 3e-72 Identities = 190/213 (89%), Gaps = 5/213 (2%) Strand=Plus/Plus Query 62 GACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAA 121 ||||||||||||||||||||||||||||||| | ||||||||||||| || || | ||| Sbjct 1 GACGGTCTAAACCCAGCTCACGTTCCCTATTGGCGGGTGAACAATCCGACACTATCAGAA 60 Query 122 TTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATG 181 ||||||||| | |||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 61 TTCTGCTTCTGAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCCACGTCGCTATG 120 Query 182 AACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTC 241 |||||||||| ||||||||||||||||||||||||||||||||||| ||||||| | || Sbjct 121 AACGCTTGGCGGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTTTCTTC 180 Query 242 AAATTTCGAGGGACTAA--AGGATCGATAGGCC 272 ||| | ||| | ||| |||||||||||||| Sbjct 181 AAACTCCGA---AATAAAGAGGATCGATAGGCC 210 >seq4770 Length=493 Score = 165 bits (182), Expect = 1e-38 Identities = 106/116 (91%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||||| |||||| |||| || || |||||||||||||||||||||||||||||| Sbjct 116 TACTAAGTTCAATTACTATTGCGGTAACATTCATCAGTAGGGTAAAACTAACCTGTCTCA 57 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTA 116 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 56 CGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854346215520