Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178365.1_202017-04-
22] 6,295 sequences; 12,671,704 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq4419 396 5e-108
seq4711 304 2e-80
seq4079 277 3e-72
seq4770 165 1e-38
>seq4419
Length=351
Score = 396 bits (438), Expect = 5e-108
Identities = 225/229 (98%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 67 TCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTG 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 TCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTG 60
Query 127 CTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGC 186
|||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||
Sbjct 61 CTTCGGTATGATAGGAAGAGCCGACATCGAAGAATCAAAAAGCAATGTCGCTATGAACGC 120
Query 187 TTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATT 246
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 121 TTGACTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATT 180
Query 247 TCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 181 CCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 229
>seq4711
Length=467
Score = 304 bits (336), Expect = 2e-80
Identities = 204/228 (89%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 67 TCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTG 126
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1 TCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTGGTGAATTCTG 60
Query 127 CTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGC 186
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 61 CTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGC 120
Query 187 TTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATT 246
||||||||||||||||||||||||||||||||||||||||| ||||||| || | |||
Sbjct 121 TTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTTGCTTAAAACC 180
Query 247 TCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCA 294
| | | |||||||||||||||| | ||||| ||| ||||||||
Sbjct 181 CCTAAAATCAAAAGGATCGATAGGCCCCGCTTTCGCGGTCTGTATTCA 228
>seq4079
Length=261
Score = 277 bits (306), Expect = 3e-72
Identities = 190/213 (89%), Gaps = 5/213 (2%)
Strand=Plus/Plus
Query 62 GACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAA 121
||||||||||||||||||||||||||||||| | ||||||||||||| || || | |||
Sbjct 1 GACGGTCTAAACCCAGCTCACGTTCCCTATTGGCGGGTGAACAATCCGACACTATCAGAA 60
Query 122 TTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATG 181
||||||||| | |||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 61 TTCTGCTTCTGAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCCACGTCGCTATG 120
Query 182 AACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTC 241
|||||||||| ||||||||||||||||||||||||||||||||||| ||||||| | ||
Sbjct 121 AACGCTTGGCGGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTTTCTTC 180
Query 242 AAATTTCGAGGGACTAA--AGGATCGATAGGCC 272
||| | ||| | ||| ||||||||||||||
Sbjct 181 AAACTCCGA---AATAAAGAGGATCGATAGGCC 210
>seq4770
Length=493
Score = 165 bits (182), Expect = 1e-38
Identities = 106/116 (91%), Gaps = 0/116 (0%)
Strand=Plus/Minus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
||||||| |||||| |||| || || ||||||||||||||||||||||||||||||
Sbjct 116 TACTAAGTTCAATTACTATTGCGGTAACATTCATCAGTAGGGTAAAACTAACCTGTCTCA 57
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTA 116
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 56 CGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTA 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 854346215520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |