Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178365.1_202017-04- 22] 6,295 sequences; 12,671,704 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq4895 257 2e-66 seq5005 102 8e-20 >seq4895 Length=560 Score = 257 bits (284), Expect = 2e-66 Identities = 173/191 (91%), Gaps = 2/191 (1%) Strand=Plus/Plus Query 2 GAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCT-TTGCTCGAATA 60 |||||||||||||||||||||||||||||||| ||||||||||||| | ||||||||||| Sbjct 181 GAACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCGTATTGCTCGAATA 240 Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120 |||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||| Sbjct 241 TATTAGCATGGAATAATAGAATAGGACGTTTGGTTCTATTTTGTTGGTTTCTAGGACC-A 299 Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180 ||||||||| |||| ||| |||||||| ||||||||||||||||| ||||||||||| Sbjct 300 TCGTAATGATTAATAGGGACGGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTC 359 Query 181 TTGGATTTATT 191 ||||||||||| Sbjct 360 TTGGATTTATT 370 >seq5005 Length=629 Score = 102 bits (112), Expect = 8e-20 Identities = 138/188 (73%), Gaps = 7/188 (4%) Strand=Plus/Plus Query 4 ACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCC----TTTGCTCGAAT 59 ||| | | |||||| ||||||||||||||| ||||||||||| || | || |||| Sbjct 186 ACCGGAATTTTTACCTTGAAAAAATTAGAGTGTTCAAAGCAGACCTGATTATGTCTGAAT 245 Query 60 ACATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCG 119 | |||||||||||| |||| || | ||||||||||| | ||||| | ||| | Sbjct 246 ATTCGTGCATGGAATAATAAAATAAGAACT-TGGTTCTATTTTATTGGTTT-TCGGAACT 303 Query 120 CCCG-TAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAAT 178 | | ||||||| || | ||| || |||||| || ||| || || | ||||||||| Sbjct 304 CGAGTTAATGATTAAGAGGGACAGACGGGGGCATCCGTACTCTGCCGTTAGAGGTGAAAT 363 Query 179 TCTTGGAT 186 |||||||| Sbjct 364 TCTTGGAT 371 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511968776800