Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178365.1_202017-04- 22] 6,295 sequences; 12,671,704 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq5460 706 0.0 seq4419 141 3e-31 seq4711 107 6e-21 seq6232 82.4 2e-13 >seq5460 Length=1311 Score = 706 bits (782), Expect = 0.0 Identities = 462/501 (92%), Gaps = 10/501 (2%) Strand=Plus/Plus Query 48 TTAGGACACCTGCGTTATGGTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGAC 107 |||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 1 TTAGGACATCTGCGTTATCGTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGAC 60 Query 108 AATGTCATCAACCCGGATCGGCCCGCGAA--GGACCTT-AACGCCAGAAAATGGTCGGTG 164 |||||| |||||||||||| |||| |||| ||||||| || || |||| ||| || Sbjct 61 AATGTCTTCAACCCGGATCAGCCC-CGAATGGGACCTTGAATGCTAGAACGTGGAAAATG 119 Query 165 AAGACCAGTTCCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTT 224 || |||| ||||||||||||| |||||||| |||| |||| ||||||||||||||||| Sbjct 120 AATTCCAGCTCCGCTTCATTGAATAAGTAAAGAAACTATAAAGGTAGTGGTATTTCACTG 179 Query 225 GCGCCGAAACGGCTCCCACTTATTC-TACACCTCTCAA-GTCATTTCACAAAGTCGGACT 282 |||||||| ||||||||||| || |||||| ||| | ||| ||||||| ||| ||| Sbjct 180 GCGCCGAA---GCTCCCACTTAATCCTACACC-CTCTATGTCTCTTCACAATGTCAAACT 235 Query 283 AGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGC 342 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 236 AGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGC 295 Query 343 TGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCG 402 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 296 TGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCG 355 Query 403 TCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGT 462 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 356 TCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGT 415 Query 463 TTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACA 522 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 416 TTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACA 475 Query 523 TTGCGTCAACATCACTTTCTG 543 |||||||||||||| |||||| Sbjct 476 TTGCGTCAACATCAGTTTCTG 496 >seq4419 Length=351 Score = 141 bits (156), Expect = 3e-31 Identities = 86/91 (95%), Gaps = 0/91 (0%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| ||||| |||||||||||||||||||||| ||||||||||||| ||||||||| Sbjct 261 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGCCCCCCTTAGGACATCTGCGTTATC 320 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTC 97 ||||||||||||||||||||||||||||||| Sbjct 321 GTTTAACAGATGTGCCGCCCCAGCCAAACTC 351 >seq4711 Length=467 Score = 107 bits (118), Expect = 6e-21 Identities = 88/107 (82%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||||||||| ||| ||||||| | | |||| ||||||||||||||||||| | Sbjct 261 CTTTTGCTCTACGTGAGGTTTCTGTCCCCACTGAGCTTGCCTTAGGACACCTGCGTTACG 320 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113 ||| |||||||| ||||||||| |||||||||| |||||| |||| Sbjct 321 CTTTGACAGATGTACCGCCCCAGTCAAACTCCCCGCCTGACGCTGTC 367 >seq6232 Length=37552 Score = 82.4 bits (90), Expect = 2e-13 Identities = 50/53 (94%), Gaps = 0/53 (0%) Strand=Plus/Minus Query 48 TTAGGACACCTGCGTTATGGTTTAACAGATGTGCCGCCCCAGCCAAACTCCCC 100 |||||||| ||||||||| ||||||||||||||||||||||||||||||| || Sbjct 37552 TTAGGACATCTGCGTTATCGTTTAACAGATGTGCCGCCCCAGCCAAACTCTCC 37500 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635097064160