Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178365.1_202017-04-
22] 6,295 sequences; 12,671,704 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq5460 706 0.0
seq4419 141 3e-31
seq4711 107 6e-21
seq6232 82.4 2e-13
>seq5460
Length=1311
Score = 706 bits (782), Expect = 0.0
Identities = 462/501 (92%), Gaps = 10/501 (2%)
Strand=Plus/Plus
Query 48 TTAGGACACCTGCGTTATGGTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGAC 107
|||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1 TTAGGACATCTGCGTTATCGTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGAC 60
Query 108 AATGTCATCAACCCGGATCGGCCCGCGAA--GGACCTT-AACGCCAGAAAATGGTCGGTG 164
|||||| |||||||||||| |||| |||| ||||||| || || |||| ||| ||
Sbjct 61 AATGTCTTCAACCCGGATCAGCCC-CGAATGGGACCTTGAATGCTAGAACGTGGAAAATG 119
Query 165 AAGACCAGTTCCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTT 224
|| |||| ||||||||||||| |||||||| |||| |||| |||||||||||||||||
Sbjct 120 AATTCCAGCTCCGCTTCATTGAATAAGTAAAGAAACTATAAAGGTAGTGGTATTTCACTG 179
Query 225 GCGCCGAAACGGCTCCCACTTATTC-TACACCTCTCAA-GTCATTTCACAAAGTCGGACT 282
|||||||| ||||||||||| || |||||| ||| | ||| ||||||| ||| |||
Sbjct 180 GCGCCGAA---GCTCCCACTTAATCCTACACC-CTCTATGTCTCTTCACAATGTCAAACT 235
Query 283 AGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGC 342
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 236 AGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGC 295
Query 343 TGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCG 402
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 296 TGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCG 355
Query 403 TCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGT 462
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 356 TCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGT 415
Query 463 TTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACA 522
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 416 TTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACA 475
Query 523 TTGCGTCAACATCACTTTCTG 543
|||||||||||||| ||||||
Sbjct 476 TTGCGTCAACATCAGTTTCTG 496
>seq4419
Length=351
Score = 141 bits (156), Expect = 3e-31
Identities = 86/91 (95%), Gaps = 0/91 (0%)
Strand=Plus/Plus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
|||||| ||||| |||||||||||||||||||||| ||||||||||||| |||||||||
Sbjct 261 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGCCCCCCTTAGGACATCTGCGTTATC 320
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTC 97
|||||||||||||||||||||||||||||||
Sbjct 321 GTTTAACAGATGTGCCGCCCCAGCCAAACTC 351
>seq4711
Length=467
Score = 107 bits (118), Expect = 6e-21
Identities = 88/107 (82%), Gaps = 0/107 (0%)
Strand=Plus/Plus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
|||||||||||| ||| ||||||| | | |||| ||||||||||||||||||| |
Sbjct 261 CTTTTGCTCTACGTGAGGTTTCTGTCCCCACTGAGCTTGCCTTAGGACACCTGCGTTACG 320
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113
||| |||||||| ||||||||| |||||||||| |||||| ||||
Sbjct 321 CTTTGACAGATGTACCGCCCCAGTCAAACTCCCCGCCTGACGCTGTC 367
>seq6232
Length=37552
Score = 82.4 bits (90), Expect = 2e-13
Identities = 50/53 (94%), Gaps = 0/53 (0%)
Strand=Plus/Minus
Query 48 TTAGGACACCTGCGTTATGGTTTAACAGATGTGCCGCCCCAGCCAAACTCCCC 100
|||||||| ||||||||| ||||||||||||||||||||||||||||||| ||
Sbjct 37552 TTAGGACATCTGCGTTATCGTTTAACAGATGTGCCGCCCCAGCCAAACTCTCC 37500
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1635097064160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |