Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178405.1_202017-04-
21] 759 sequences; 11,795,039 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq554 131 1e-25
seq2 120 2e-22
seq6 116 3e-21
>seq554
Length=341995
Score = 131 bits (144), Expect = 1e-25
Identities = 392/605 (65%), Gaps = 0/605 (0%)
Strand=Plus/Plus
Query 66320 CCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCG 66379
|||| | ||| ||||| ||| || |||||||| ||||| || || ||| | |||
Sbjct 63412 CCATTTTCTTCGACACGCTTCATGAAAAGATCAGGAATCCATAGAGCAGGGAACAAATCT 63471
Query 66380 CGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCG 66439
| ||| || ||||| | ||||| || || | | || | || ||||| || ||
Sbjct 63472 CTTGCACGAATTTCCTCTTTACCGTGGTTCTTCCTAATATCAATAAAATCAAATATATCA 63531
Query 66440 GCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCG 66499
|||||||||||||||||||| | ||| |||| || | ||| ||||| |||||
Sbjct 63532 GCATGCCATGGTTCCAGGTAAAGGGCAAACGCACCAGGTCTTTTATTACCACCCTGGTCA 63591
Query 66500 ACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCA 66559
|| || || || || ||||| ||||| | ||| || | | |||||||| | ||
Sbjct 63592 ACATAACGGGCAGTGTTATTGAAAACACGAATCATAGGAATTAAACCGTTAGAAGTACCG 63651
Query 66560 TTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCA 66619
|| || || | ||| || || || || || | || | || ||||||||||||
Sbjct 63652 TTTGTACCAGCAATGTAAGAACCAGTTGAACGAATGTTATGGATATGTAGACCAATACCA 63711
Query 66620 CCGGCCGTCTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGGAG 66679
|| || || || || || |||||| || || || | | || || || || |||
Sbjct 63712 CCAGCAGTTTTGGAAATCAAAGCACATTCCTTCAAGGTGTCGTAAATCCCCTCGATAGAG 63771
Query 66680 TCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAG 66739
|| |||| |||| | | | | || || | ||| ||||| || || |||| |
Sbjct 63772 TCCTCCTTCATGGCAACCAAGAAACAAGAGGACATTTGAGGTTTTGGAGTACCGGCATTG 63831
Query 66740 AAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATG 66799
|| | || || | || || ||||| || | ||||||| | || ||||| || |
Sbjct 63832 AACAACGTTGGAGAGGCATGAGTAAAATATTTTAGAGACATCAAGTTATACGTTTCTAAA 63891
Query 66800 ACAGCATCAATGTTTTCGCCATGAATCCCGAGTGCACATCGCATCAGGAGGTATTGAGGC 66859
|||| || || | | || || || || ||||| || ||| | | | ||| ||
Sbjct 63892 GCAGCCTCGATATCTCTACCGTGGATGCCTAGTGCGACTCTCATAATTAAATGTTGTGGA 63951
Query 66860 CGTTCGACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACCA 66919
|||||| ||| || | ||||| | ||| || || ||||||| || || | ||||
Sbjct 63952 CGTTCGGCCACTTGACCGTTGATTCTTAGTAAATAAGAACGTTCCAAAGTTTTAAAACCA 64011
Query 66920 AAGTA 66924
|| ||
Sbjct 64012 AAATA 64016
>seq2
Length=614795
Score = 120 bits (132), Expect = 2e-22
Identities = 371/569 (65%), Gaps = 15/569 (3%)
Strand=Plus/Minus
Query 61066 TTCCCCATCGAGTATGAGGATATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGG 61125
||||| ||| |||| | || || |||| ||||| || |||||||| ||||||
Sbjct 426564 TTCCCTATCAAGTACCATGAAATCTGGCAAGCCTACAAGCGTGCCGAAGCTTCTTTCTGG 426505
Query 61126 ACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACTGGGAGCGTTTATCGAGCGGT 61185
|| | || || | |||||||| || || || |||||||| | | || ||
Sbjct 426504 ACCGCTGAAGAAATTGATTTGTCTAAGGATATCCATGACTGGAACAACAGAATGAACGA- 426446
Query 61186 GAACAACA----TTTCATTAAACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGT 61241
|||| | | ||||||| || | || || || |||||||| |||||||| ||
Sbjct 426445 GAACGAGAGATTTTTCATTTCCAGAGTTCTTGCCTTTTTCGCCGCTTCTGACGGTATTGT 426386
Query 61242 CAATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTT 61301
||||| || || | ||| ||| | || || ||| | | ||||| ||||
Sbjct 426385 TAATGAAAACTTGGTTGAAAACTTCTCCACCGAAGTCCAAATTCCAGAGGCAAAGAGTTT 426326
Query 61302 CTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGA 61361
|||||| ||||| || || || ||| | ||||| || | ||| | | |||||
Sbjct 426325 CTACGGTTTCCAAATCATGATTGAAAATATTCACTCTGAAACTTACTCCTTGTTGATCGA 426266
Query 61362 TACGTACATCAGGGAGCGGGCGGAACGTGAACGATTGTTCAATGCCATCGAGACGATACC 61421
||| ||||||| ||| | ||| ||||| |||||||||||||| | || || ||
Sbjct 426265 TACCTACATCAAGGACCCTAAAGAAAGTGAATTCTTGTTCAATGCCATTCACACCATCCC 426206
Query 61422 GG----CGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGA-TCACCAGTACAACGGCT 61476
| |||||| ||| || || ||||| || | |||| ||| | ||| ||
Sbjct 426205 AGAAATCGGTGA----GAAGGCCGAATGGGCTTTAAGATGGATTCAAGACGCTGACGCCT 426150
Query 61477 ACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCG 61536
||||||||| || | | || ||||| | || ||||| |||||| || ||
Sbjct 426149 -TGTTTGGTGAAAGACTAGTTGCCTTTGCCTCCATTGAAGGTGTCTTTTTCTCCGGTTCC 426091
Query 61537 TTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAAT 61596
|||||| | || || |||||||| || | || | ||||||||| | ||||| |||
Sbjct 426090 TTTGCCTCCATTTTCTGGTTGAAAAAGAGAGGTATGATGCCCGGTTTAACCTTTTCCAAC 426031
Query 61597 GAGTTGATATCACGCGACGAGGGCATGCA 61625
|| ||||| | | ||||| || ||||
Sbjct 426030 GAATTGATCTGTAGAGACGAAGGTTTGCA 426002
>seq6
Length=300932
Score = 116 bits (128), Expect = 3e-21
Identities = 415/644 (64%), Gaps = 10/644 (2%)
Strand=Plus/Plus
Query 66320 CCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCG 66379
||||||| || ||||| ||| || |||||||| ||||| || || ||| | |||
Sbjct 214009 CCATCCTCTTGAACACGTTTCATGAAAAGATCAGGGATCCATAGAGCAGGGAACAAATCT 214068
Query 66380 CGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCG 66439
| ||| || || || | || || |||| | | |||| || || ||||| ||
Sbjct 214069 CTTGCACGAATTTCTTCCTTACCATGTGTTTTTCTGATATCGACAAAGTCGAAGATATCT 214128
Query 66440 GCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCG 66499
||||||||||| |||| | | | |||||| | || | ||| ||||| |||||
Sbjct 214129 GCATGCCATGGCTCCAAGAAAAGGGCGAAGGCACCAGGTCTCTTGTTACCACCCTGGTCC 214188
Query 66500 ACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCA 66559
|| || || || ||| ||||| ||||| | ||| || | | |||||| || | ||
Sbjct 214189 ACATAACGGGCAGTATTATTGAAAACACGAATCATAGGAATCAACCCGTTTGAAGTACCG 214248
Query 66560 TTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCA 66619
||||| || |||| || ||| | || || | || | || ||||||| ||||
Sbjct 214249 TTGGTACCAGCGATATAAGAACCTGTGGAACGGATGTTGTTGATATGAAGACCAACACCA 214308
Query 66620 CCGGCCGTCTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGGAG 66679
|| || || || || || |||||| || || || | || || || || |||
Sbjct 214309 CCTGCAGTTTTGGAAATCATAGCACATTCTTTCAAAGTATCATAAATACCTTCGATAGAG 214368
Query 66680 TCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAG 66739
||| |||| |||| | | | | |||||| | ||| || | || || | || |
Sbjct 214369 TCATCCTTCATGGCAATTAAGAAACATGAAGACATTTGAGGATGTGGCGTACCAGCGTTG 214428
Query 66740 AAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATG 66799
|| | || || | |||||| || ||||| ||||| |||| || |||| |
Sbjct 214429 AATAAAGTTGGGGAAGCGTGAGTGAAGTATCTTAACGACATCAAATTATAAGTCTTCAGC 214488
Query 66800 ACAGCATCAATGTTTTCGCCATGAATCCCGAGTG-CACATCGCATCAGGAGGTATTGAGG 66858
|||| || || | ||||| || || || | |||| ||||| | | | |||||
Sbjct 214489 ACAGATTCGATATCGCTACCATGGATACCTAGCGCCACA-CGCATTACCAAATGCTGAGG 214547
Query 66859 CCGTTCGACCA----GCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGA 66914
||||| ||| ||| || | || || ||||| || || ||||| |||||||
Sbjct 214548 ACGTTCTGCCACTTCACCGTTCAGTCTTA-GC---AAGTACGAACGCTCCAGTGTCTTGA 214603
Query 66915 TACCAAAGTACGAGTAATTGAAATCGTTAGCATGCACGATGGCC 66958
|| || |||| || | |||||| || | | ||||||||||
Sbjct 214604 ATCCGAAATACGTATACTGGAAATCCCTATCGTACACGATGGCC 214647
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397564322371760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |