Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178425.1_202017-04- 24] 2,430 sequences; 12,162,484 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq23 145 6e-30 seq880 120 2e-22 seq1 116 3e-21 >seq23 Length=76767 Score = 145 bits (160), Expect = 6e-30 Identities = 395/605 (65%), Gaps = 0/605 (0%) Strand=Plus/Plus Query 66320 CCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCG 66379 |||| | ||| ||||| ||| || |||||||| ||||| || || ||| | ||| Sbjct 63467 CCATTTTCTTCGACACGCTTCATGAAAAGATCAGGAATCCATAGAGCAGGGAACAAATCT 63526 Query 66380 CGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCG 66439 | ||| || ||||| | ||||| || || | | || | || |||||||| || Sbjct 63527 CTTGCACGAATTTCCTCTTTACCGTGGTTCTTCCTAATATCAATAAAATCAAAGATATCA 63586 Query 66440 GCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCG 66499 |||||||||||||||||||| | ||| |||| || | ||| ||||| ||||| Sbjct 63587 GCATGCCATGGTTCCAGGTAAAGGGCAAACGCACCAGGTCTTTTATTACCACCCTGGTCA 63646 Query 66500 ACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCA 66559 || || || ||| || ||||| ||||| | ||| || | | |||||||| | || Sbjct 63647 ACATAACGGGCGGTGTTATTGAAAACACGAATCATAGGAATTAAACCGTTAGAAGTACCG 63706 Query 66560 TTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCA 66619 || || || | ||| || || || || || | || | || |||||||||||| Sbjct 63707 TTTGTACCAGCAATGTAAGAACCAGTTGAACGAATGTTATGGATATGTAGACCAATACCA 63766 Query 66620 CCGGCCGTCTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGGAG 66679 || || || || || || |||||| || || || | | || || || || ||| Sbjct 63767 CCAGCAGTTTTGGAAATCAAAGCACATTCCTTCAAGGTGTCGTAAATCCCCTCGATAGAG 63826 Query 66680 TCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAG 66739 || |||| |||| | | | | || || | ||| ||||| || || |||| | Sbjct 63827 TCCTCCTTCATGGCAACCAAGAAACAAGAGGACATTTGAGGTTTTGGAGTACCGGCATTG 63886 Query 66740 AAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATG 66799 || | || || | ||||| ||||| || | ||||||| | || ||||| || | Sbjct 63887 AACAACGTTGGAGAGGCGTGAGTAAAATATTTTAGAGACATCAAGTTATACGTTTCTAAA 63946 Query 66800 ACAGCATCAATGTTTTCGCCATGAATCCCGAGTGCACATCGCATCAGGAGGTATTGAGGC 66859 |||| || || | | || || || || ||||| || ||| | | | ||| || Sbjct 63947 GCAGCCTCGATATCTCTACCGTGGATGCCTAGTGCGACTCTCATAATTAAATGTTGTGGA 64006 Query 66860 CGTTCGACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACCA 66919 |||||| ||| || | ||||| | ||| || || ||||||| || || | |||| Sbjct 64007 CGTTCGGCCACTTGACCGTTGATTCTTAGTAAATAAGAACGTTCCAAAGTTTTAAAACCA 64066 Query 66920 AAGTA 66924 || || Sbjct 64067 AAATA 64071 >seq880 Length=62585 Score = 120 bits (132), Expect = 2e-22 Identities = 371/569 (65%), Gaps = 15/569 (3%) Strand=Plus/Minus Query 61066 TTCCCCATCGAGTATGAGGATATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGG 61125 ||||| ||| |||| | || || |||| ||||| || |||||||| |||||| Sbjct 33771 TTCCCTATCAAGTACCATGAAATCTGGCAAGCCTACAAGCGTGCCGAAGCTTCTTTCTGG 33712 Query 61126 ACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACTGGGAGCGTTTATCGAGCGGT 61185 || | || || | |||||||| || || || |||||||| | | || || Sbjct 33711 ACCGCTGAAGAAATTGATTTGTCTAAGGATATCCATGACTGGAACAACAGAATGAACGA- 33653 Query 61186 GAACAACA----TTTCATTAAACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGT 61241 |||| | | ||||||| || | || || || |||||||| |||||||| || Sbjct 33652 GAACGAGAGATTTTTCATTTCCAGAGTTCTTGCCTTTTTCGCCGCTTCTGACGGTATTGT 33593 Query 61242 CAATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTT 61301 ||||| || || | ||| ||| | || || ||| | | ||||| |||| Sbjct 33592 TAATGAAAACTTGGTTGAAAACTTCTCCACCGAAGTCCAAATTCCAGAGGCAAAGAGTTT 33533 Query 61302 CTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGA 61361 |||||| ||||| || || || ||| | ||||| || | ||| | | ||||| Sbjct 33532 CTACGGTTTCCAAATCATGATTGAAAATATTCACTCTGAAACTTACTCCTTGTTGATCGA 33473 Query 61362 TACGTACATCAGGGAGCGGGCGGAACGTGAACGATTGTTCAATGCCATCGAGACGATACC 61421 ||| ||||||| ||| | ||| ||||| |||||||||||||| | || || || Sbjct 33472 TACCTACATCAAGGACCCTAAAGAAAGTGAATTCTTGTTCAATGCCATTCACACCATCCC 33413 Query 61422 GG----CGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGA-TCACCAGTACAACGGCT 61476 | |||||| ||| || || ||||| || | |||| ||| | ||| || Sbjct 33412 AGAAATCGGTGA----GAAGGCCGAATGGGCTTTAAGATGGATTCAAGACGCTGACGCCT 33357 Query 61477 ACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCG 61536 ||||||||| || | | || ||||| | || ||||| |||||| || || Sbjct 33356 -TGTTTGGTGAAAGACTAGTTGCCTTTGCCTCCATTGAAGGTGTCTTTTTCTCCGGTTCC 33298 Query 61537 TTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAAT 61596 |||||| | || || |||||||| || | || | ||||||||| | ||||| ||| Sbjct 33297 TTTGCCTCCATTTTCTGGTTGAAAAAGAGAGGTATGATGCCCGGTTTAACCTTTTCCAAC 33238 Query 61597 GAGTTGATATCACGCGACGAGGGCATGCA 61625 || ||||| | | ||||| || |||| Sbjct 33237 GAATTGATCTGTAGAGACGAAGGTTTGCA 33209 >seq1 Length=236762 Score = 116 bits (128), Expect = 3e-21 Identities = 415/644 (64%), Gaps = 10/644 (2%) Strand=Plus/Minus Query 66320 CCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCG 66379 ||||||| || ||||| ||| || |||||||| ||||| || || ||| | ||| Sbjct 63212 CCATCCTCTTGAACACGTTTCATGAAAAGATCAGGGATCCATAGAGCAGGGAACAAATCT 63153 Query 66380 CGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCG 66439 | ||| || || || | || || |||| | | |||| || || ||||| || Sbjct 63152 CTTGCACGAATTTCTTCCTTACCATGTGTTTTTCTGATATCGACAAAGTCGAAGATATCT 63093 Query 66440 GCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCG 66499 ||||||||||| |||| | | | |||||| | || | ||| ||||| ||||| Sbjct 63092 GCATGCCATGGCTCCAAGAAAAGGGCGAAAGCACCAGGTCTCTTGTTACCACCCTGGTCC 63033 Query 66500 ACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCA 66559 || || || || ||| ||||| ||||| | ||| || | | |||||| || | || Sbjct 63032 ACATAACGGGCAGTATTATTGAAAACACGAATCATAGGAATCAACCCGTTTGAAGTACCG 62973 Query 66560 TTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCA 66619 ||||| || |||| || ||| | || || | || | || ||||||| |||| Sbjct 62972 TTGGTACCAGCGATATAAGAACCTGTGGAACGGATGTTGTTGATATGAAGACCAACACCA 62913 Query 66620 CCGGCCGTCTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGGAG 66679 || || || || || || |||||| || || || | || || || || ||| Sbjct 62912 CCTGCAGTTTTGGAAATCATAGCACATTCTTTCAAAGTATCATAAATACCTTCGATAGAG 62853 Query 66680 TCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAG 66739 ||| |||| |||| | | | | |||||| | ||| || | || || | || | Sbjct 62852 TCATCCTTCATGGCAATTAAGAAACATGAAGACATTTGAGGATGTGGCGTACCAGCGTTG 62793 Query 66740 AAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATG 66799 || | || || | |||||| || ||||| ||||| |||| || |||| | Sbjct 62792 AATAAAGTTGGGGAAGCGTGAGTGAAGTATCTTAACGACATCAAATTATAAGTCTTCAGT 62733 Query 66800 ACAGCATCAATGTTTTCGCCATGAATCCCGAGTG-CACATCGCATCAGGAGGTATTGAGG 66858 |||| || || | ||||| || || || | |||| ||||| | | | ||||| Sbjct 62732 ACAGATTCGATATCGCTACCATGGATACCTAGCGCCACA-CGCATTACCAAATGCTGAGG 62674 Query 66859 CCGTTCGACCA----GCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGA 66914 ||||| ||| ||| || | || || ||||| || || ||||| ||||||| Sbjct 62673 ACGTTCTGCCACTTCACCGTTCAGTCTTA-GC---AAGTACGAACGCTCCAGTGTCTTGA 62618 Query 66915 TACCAAAGTACGAGTAATTGAAATCGTTAGCATGCACGATGGCC 66958 || || |||| || | |||||| || | | |||||||||| Sbjct 62617 ATCCGAAATACGTATACTGGAAATCCCTATCGTACACGATGGCC 62574 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397556225775200